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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. S08-1
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500 nt
OH686_04070 and OH686_04075 are separated by 14 nucleotides
OH686_04075 and OH686_04080 are separated by 4 nucleotides
OH686_04080 and OH686_04085 are separated by 19 nucleotides
OH686_04085 and OH686_04090 are separated by 71 nucleotides
OH686_04070: OH686_04070 - Terpene utilization protein AtuA, at 835,330 to 837,117
_04070
OH686_04075: OH686_04075 - Citronellol dehydrogenase / Citronellal dehydrogenase, at 837,132 to 838,004
_04075
OH686_04080: OH686_04080 - Geranyl-CoA carboxylase carboxyl transferase subunit , at 838,009 to 839,625
_04080
OH686_04085: OH686_04085 - Citronellyl-CoA dehydrogenase, at 839,645 to 840,805
_04085
OH686_04090: OH686_04090 - Isohexenylglutaconyl-CoA hydratase , at 840,877 to 841,671
_04090
Group
Condition
OH686
_04070
OH686
_04075
OH686
_04080
OH686
_04085
OH686
_04090
carbon source
octanoate (C)
+0.2
-0.5
-0.2
-0.2
N.D.
carbon source
Trisodium citrate (C)
-0.1
-0.3
-0.0
-0.1
N.D.
carbon source
D,L-Malic Acid (C)
+0.0
-0.4
+0.0
-0.1
N.D.
carbon source
Trisodium citrate (C)
-0.1
-0.4
+0.0
+0.1
N.D.
carbon source
D-Glucose (C)
-0.1
-0.2
-0.1
-0.0
N.D.
carbon source
octanoate (C)
-0.1
-0.2
-0.3
+0.2
N.D.
carbon source
Sorgoleone (C)
-0.0
-0.3
-0.0
+0.0
N.D.
carbon source
Trisodium citrate (C)
-0.1
-0.0
-0.0
-0.2
N.D.
carbon source
octanoate (C)
+0.1
-1.0
+0.4
+0.3
N.D.
carbon source
Trisodium citrate (C)
-0.0
-0.1
+0.0
-0.1
N.D.
carbon source
D-Glucose (C)
-0.3
-0.1
+0.0
+0.1
N.D.
carbon source
D-Glucose (C)
+0.1
-0.0
-0.2
+0.0
N.D.
carbon source
Trisodium citrate (C)
-0.0
-0.1
+0.1
-0.2
N.D.
carbon source
D-Glucose (C)
+0.1
-0.2
-0.1
+0.1
N.D.
carbon source
acetate (C)
-0.1
+0.0
+0.1
-0.1
N.D.
carbon source
octanoate (C)
+0.1
-0.1
-0.2
+0.1
N.D.
carbon source
D-Glucose (C)
-0.0
+0.0
-0.1
+0.1
N.D.
carbon source
octanoate (C)
+0.0
-0.0
+0.1
-0.1
N.D.
carbon source
D-Glucose (C)
+0.0
-0.1
-0.1
+0.1
N.D.
carbon source
Trisodium citrate (C)
-0.1
+0.2
-0.0
-0.0
N.D.
carbon source
Trisodium citrate (C)
+0.1
-0.1
+0.1
+0.1
N.D.
carbon source
acetate (C)
+0.1
-0.1
+0.0
+0.1
N.D.
carbon source
Trisodium citrate (C)
+0.2
+0.0
-0.0
-0.1
N.D.
carbon source
D-Glucose (C)
-0.0
+0.2
+0.1
+0.0
N.D.
carbon source
acetate (C)
+0.1
-0.0
+0.1
+0.1
N.D.
carbon source
D-Glucose (C)
+0.1
+0.3
-0.2
+0.0
N.D.
carbon source
acetate (C)
-0.0
+0.2
+0.1
+0.1
N.D.
carbon source
acetate (C)
+0.0
+0.3
+0.2
-0.0
N.D.
carbon source
octanoate (C)
+0.2
+0.0
+0.2
+0.1
N.D.
carbon source
acetate (C)
+0.1
+0.3
+0.1
+0.1
N.D.
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