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Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. S08-1
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500 nt
OH686_03135 and OH686_03140 are separated by 242 nucleotides
OH686_03140 and OH686_03145 overlap by 4 nucleotides
OH686_03145 and OH686_03150 are separated by 64 nucleotides
OH686_03150 and OH686_03155 are separated by 107 nucleotides
OH686_03135: OH686_03135 - Superfamily II DNA/RNA , SNF2 family, at 656,312 to 656,668
_03135
OH686_03140: OH686_03140 - Putative short-chain dehydrogenase, at 656,911 to 657,672
_03140
OH686_03145: OH686_03145 - hypothetical protein, at 657,669 to 658,511
_03145
OH686_03150: OH686_03150 - Cyclohexanone monooxygenase , at 658,576 to 660,051
_03150
OH686_03155: OH686_03155 - Transcriptional regulator, AraC family, at 660,159 to 661,169
_03155
Group
Condition
OH686
_03135
OH686
_03140
OH686
_03145
OH686
_03150
OH686
_03155
carbon source
octanoate (C)
-0.3
-0.2
-0.2
-0.3
-0.2
carbon source
octanoate (C)
-0.2
-0.6
-0.2
-0.1
-0.1
carbon source
acetate (C)
-0.1
-0.1
-0.1
-0.1
-0.2
carbon source
octanoate (C)
-0.0
-0.2
-0.2
-0.2
+0.0
carbon source
acetate (C)
-0.1
-0.1
-0.1
-0.1
-0.1
carbon source
Trisodium citrate (C)
-0.2
-0.0
+0.1
-0.1
-0.3
carbon source
D-Glucose (C)
-0.0
-0.2
+0.0
-0.1
-0.2
carbon source
D-Glucose (C)
-0.2
+0.1
-0.1
-0.1
-0.1
carbon source
D-Glucose (C)
-0.2
-0.1
-0.1
-0.1
+0.0
carbon source
D,L-Malic Acid (C)
-0.1
-0.2
-0.1
+0.0
-0.0
carbon source
acetate (C)
+0.0
-0.2
-0.1
-0.1
-0.1
carbon source
D,L-Malic Acid (C)
-0.2
-0.1
-0.1
-0.0
-0.0
carbon source
octanoate (C)
-0.1
-0.3
+0.1
-0.1
+0.0
carbon source
acetate (C)
-0.1
+0.0
+0.0
-0.1
-0.2
carbon source
D-Glucose (C)
-0.0
-0.1
+0.0
+0.0
-0.2
carbon source
acetate (C)
-0.1
+0.1
+0.1
-0.1
-0.4
carbon source
Sorgoleone (C)
-0.2
+0.1
+0.0
-0.0
-0.3
carbon source
D-Glucose (C)
-0.3
-0.1
-0.0
-0.0
+0.1
carbon source
Trisodium citrate (C)
-0.1
-0.1
+0.1
-0.1
-0.1
carbon source
D-Glucose (C)
+0.1
-0.1
-0.1
-0.1
-0.1
carbon source
D-Glucose (C)
-0.1
+0.0
-0.1
-0.0
-0.1
carbon source
Sorgoleone (C)
-0.2
-0.0
+0.1
-0.0
-0.1
carbon source
D-Glucose (C)
-0.0
-0.1
+0.1
+0.0
-0.1
carbon source
Sorgoleone (C)
-0.1
+0.1
+0.0
-0.1
-0.1
carbon source
octanoate (C)
+0.1
+0.1
-0.0
+0.0
-0.2
carbon source
Trisodium citrate (C)
+0.1
+0.1
-0.0
-0.1
-0.1
carbon source
Sorgoleone (C)
-0.0
+0.1
+0.1
-0.1
-0.0
carbon source
Trisodium citrate (C)
+0.0
+0.1
+0.1
-0.0
-0.2
carbon source
D,L-Malic Acid (C)
+0.0
+0.1
+0.0
-0.1
+0.1
carbon source
D-Glucose (C)
-0.0
+0.3
+0.0
+0.0
-0.1
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