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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. S08-1
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500 nt
OH686_02220 and OH686_02225 are separated by 46 nucleotides
OH686_02225 and OH686_02230 overlap by 8 nucleotides
OH686_02230 and OH686_02235 are separated by 97 nucleotides
OH686_02235 and OH686_02240 are separated by 84 nucleotides
OH686_02220: OH686_02220 - cadmium-translocating P-type ATPase, at 476,238 to 478,643
_02220
OH686_02225: OH686_02225 - cytochrome oxidase maturation protein, cbb3-type, at 478,690 to 478,896
_02225
OH686_02230: OH686_02230 - Heavy-metal-associated domain (N-terminus) and membrane-bounded cytochrome biogenesis cycZ-like domain, putative membrane copper tolerance protein, at 478,889 to 479,572
_02230
OH686_02235: OH686_02235 - oxygen-independent coproporphyrinogen III oxidase, at 479,670 to 481,052
_02235
OH686_02240: OH686_02240 - hypothetical protein, at 481,137 to 481,601
_02240
Group
Condition
OH686
_02220
OH686
_02225
OH686
_02230
OH686
_02235
OH686
_02240
carbon source
octanoate (C)
N.D.
N.D.
N.D.
-0.7
-2.6
carbon source
octanoate (C)
N.D.
N.D.
N.D.
-0.3
-2.5
carbon source
octanoate (C)
N.D.
N.D.
N.D.
-0.9
-1.4
carbon source
D-Glucose (C)
N.D.
N.D.
N.D.
+0.2
-1.8
carbon source
Trisodium citrate (C)
N.D.
N.D.
N.D.
-0.4
-1.1
carbon source
Sorgoleone (C)
N.D.
N.D.
N.D.
+0.1
-1.5
carbon source
Trisodium citrate (C)
N.D.
N.D.
N.D.
-0.2
-1.0
carbon source
Sorgoleone (C)
N.D.
N.D.
N.D.
-0.1
-1.0
carbon source
acetate (C)
N.D.
N.D.
N.D.
-0.0
-0.9
carbon source
Trisodium citrate (C)
N.D.
N.D.
N.D.
-0.3
-0.5
carbon source
D-Glucose (C)
N.D.
N.D.
N.D.
-0.3
-0.4
carbon source
acetate (C)
N.D.
N.D.
N.D.
-0.3
-0.4
carbon source
acetate (C)
N.D.
N.D.
N.D.
-0.3
-0.4
carbon source
acetate (C)
N.D.
N.D.
N.D.
-0.3
-0.3
carbon source
Trisodium citrate (C)
N.D.
N.D.
N.D.
-0.2
-0.2
carbon source
D-Glucose (C)
N.D.
N.D.
N.D.
+0.2
-0.6
carbon source
acetate (C)
N.D.
N.D.
N.D.
-0.1
-0.3
carbon source
D-Glucose (C)
N.D.
N.D.
N.D.
+0.2
-0.5
carbon source
D-Glucose (C)
N.D.
N.D.
N.D.
+0.1
-0.5
carbon source
acetate (C)
N.D.
N.D.
N.D.
+0.1
-0.3
carbon source
D-Glucose (C)
N.D.
N.D.
N.D.
+0.2
-0.4
carbon source
D-Glucose (C)
N.D.
N.D.
N.D.
-0.2
+0.4
carbon source
D-Glucose (C)
N.D.
N.D.
N.D.
-0.2
+0.4
carbon source
acetate (C)
N.D.
N.D.
N.D.
-0.3
+0.5
carbon source
octanoate (C)
N.D.
N.D.
N.D.
-0.5
+0.7
carbon source
octanoate (C)
N.D.
N.D.
N.D.
-0.5
+0.8
carbon source
acetate (C)
N.D.
N.D.
N.D.
-0.2
+0.5
carbon source
D-Glucose (C)
N.D.
N.D.
N.D.
-0.1
+0.4
carbon source
Sorgoleone (C)
N.D.
N.D.
N.D.
-0.1
+0.6
carbon source
D-Glucose (C)
N.D.
N.D.
N.D.
+0.2
+0.4
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