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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. S08-1
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500 nt
OH686_02200 and OH686_02205 overlap by 4 nucleotides
OH686_02205 and OH686_02210 are separated by 133 nucleotides
OH686_02210 and OH686_02215 are separated by 14 nucleotides
OH686_02215 and OH686_02220 are separated by 13 nucleotides
OH686_02200: OH686_02200 - Cytochrome c oxidase (cbb3-type) subunit CcoQ , at 473,010 to 473,183
_02200
OH686_02205: OH686_02205 - cytochrome c oxidase, cbb3-type, subunit III, at 473,180 to 474,157
_02205
OH686_02210: OH686_02210 - cytochrome c oxidase accessory protein CcoG, at 474,291 to 475,706
_02210
OH686_02215: OH686_02215 - Putative analog of CcoH, COG3198, at 475,721 to 476,224
_02215
OH686_02220: OH686_02220 - cadmium-translocating P-type ATPase, at 476,238 to 478,643
_02220
Group
Condition
OH686
_02200
OH686
_02205
OH686
_02210
OH686
_02215
OH686
_02220
carbon source
D-Glucose (C)
N.D.
-2.4
-1.8
-3.0
N.D.
carbon source
D-Glucose (C)
N.D.
-2.3
-1.9
-2.9
N.D.
carbon source
D-Glucose (C)
N.D.
-2.6
-1.7
-2.8
N.D.
carbon source
D-Glucose (C)
N.D.
-2.3
-1.9
-2.8
N.D.
carbon source
octanoate (C)
N.D.
-1.7
-1.8
-2.7
N.D.
carbon source
octanoate (C)
N.D.
-2.3
-1.9
-1.9
N.D.
carbon source
D-Glucose (C)
N.D.
-2.3
-1.0
-2.5
N.D.
carbon source
octanoate (C)
N.D.
-1.4
-1.8
-2.4
N.D.
carbon source
octanoate (C)
N.D.
-0.9
-1.5
-2.9
N.D.
carbon source
acetate (C)
N.D.
-1.8
-0.8
-2.4
N.D.
carbon source
D-Glucose (C)
N.D.
-1.3
-0.7
-3.0
N.D.
carbon source
D,L-Malic Acid (C)
N.D.
-1.7
-0.4
-2.3
N.D.
carbon source
Trisodium citrate (C)
N.D.
-1.8
-0.5
-2.0
N.D.
carbon source
D-Glucose (C)
N.D.
-2.0
-0.8
-1.2
N.D.
carbon source
D-Glucose (C)
N.D.
-1.8
-1.0
-1.2
N.D.
carbon source
D-Glucose (C)
N.D.
-1.5
-0.8
-1.4
N.D.
carbon source
D-Glucose (C)
N.D.
-2.1
-0.8
-0.8
N.D.
carbon source
D-Glucose (C)
N.D.
-1.3
-0.8
-1.6
N.D.
carbon source
Trisodium citrate (C)
N.D.
-1.4
-0.6
-1.5
N.D.
carbon source
Trisodium citrate (C)
N.D.
-1.6
-0.4
-1.3
N.D.
carbon source
Trisodium citrate (C)
N.D.
-0.7
-0.5
-1.9
N.D.
carbon source
Trisodium citrate (C)
N.D.
-0.7
-0.6
-1.6
N.D.
carbon source
Trisodium citrate (C)
N.D.
-1.8
-0.5
-0.5
N.D.
carbon source
acetate (C)
N.D.
-1.1
-0.4
-1.2
N.D.
carbon source
Trisodium citrate (C)
N.D.
-1.3
-0.4
-0.9
N.D.
carbon source
acetate (C)
N.D.
-1.4
-0.2
-0.9
N.D.
carbon source
D-Glucose (C)
N.D.
-1.1
-0.7
-0.5
N.D.
carbon source
Sorgoleone (C)
N.D.
-1.8
+0.1
-0.6
N.D.
carbon source
D,L-Malic Acid (C)
N.D.
-0.5
-0.3
-1.4
N.D.
carbon source
Sorgoleone (C)
N.D.
-1.1
+0.2
-1.2
N.D.
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