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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. S08-1
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500 nt
OH686_00025 and OH686_00030 are separated by 243 nucleotides
OH686_00030 and OH686_00035 are separated by 69 nucleotides
OH686_00035 and OH686_00040 are separated by 24 nucleotides
OH686_00040 and OH686_00045 are separated by 181 nucleotides
OH686_00025: OH686_00025 - 5S ribosomal RNA' product='5S ribosomal RNA, at 5,638 to 5,747
_00025
OH686_00030: OH686_00030 - queuosine biosynthesis protein QueD, at 5,991 to 6,347
_00030
OH686_00035: OH686_00035 - hypothetical protein, at 6,417 to 6,779
_00035
OH686_00040: OH686_00040 - hypothetical protein, at 6,804 to 7,883
_00040
OH686_00045: OH686_00045 - Propeptide PepSY amd peptidase M4, at 8,065 to 8,373
_00045
Group
Condition
OH686
_00025
OH686
_00030
OH686
_00035
OH686
_00040
OH686
_00045
carbon source
Sorgoleone (C)
N.D.
-0.2
-0.3
-0.0
-0.3
carbon source
D,L-Malic Acid (C)
N.D.
-0.1
-0.3
-0.0
-0.3
carbon source
Sorgoleone (C)
N.D.
-0.1
-0.4
+0.0
-0.2
carbon source
Sorgoleone (C)
N.D.
-0.2
-0.4
+0.1
-0.2
carbon source
D-Glucose (C)
N.D.
-0.2
-0.2
-0.0
-0.2
carbon source
D-Glucose (C)
N.D.
-0.1
-0.2
-0.1
-0.3
carbon source
D-Glucose (C)
N.D.
-0.1
-0.4
+0.0
-0.2
carbon source
Trisodium citrate (C)
N.D.
-0.3
-0.3
+0.0
+0.1
carbon source
D-Glucose (C)
N.D.
-0.2
-0.0
-0.0
-0.2
carbon source
D-Glucose (C)
N.D.
-0.1
-0.3
+0.0
-0.1
carbon source
D,L-Malic Acid (C)
N.D.
-0.0
-0.4
+0.0
-0.0
carbon source
Trisodium citrate (C)
N.D.
-0.1
-0.3
+0.1
-0.1
carbon source
D-Glucose (C)
N.D.
-0.1
-0.2
+0.1
-0.1
carbon source
acetate (C)
N.D.
+0.1
-0.4
+0.1
-0.2
carbon source
Trisodium citrate (C)
N.D.
-0.2
-0.3
+0.0
+0.1
carbon source
acetate (C)
N.D.
-0.0
-0.1
+0.1
-0.3
carbon source
octanoate (C)
N.D.
+0.1
-0.5
-0.0
+0.2
carbon source
octanoate (C)
N.D.
-0.0
-0.4
+0.3
-0.1
carbon source
D-Glucose (C)
N.D.
+0.2
-0.4
+0.2
-0.3
carbon source
acetate (C)
N.D.
-0.2
-0.1
+0.2
-0.1
carbon source
Trisodium citrate (C)
N.D.
-0.1
-0.2
+0.1
+0.1
carbon source
Trisodium citrate (C)
N.D.
+0.0
-0.4
+0.2
+0.0
carbon source
D-Glucose (C)
N.D.
+0.1
-0.4
+0.2
-0.0
carbon source
D-Glucose (C)
N.D.
+0.1
-0.1
+0.1
-0.2
carbon source
octanoate (C)
N.D.
-0.3
-0.6
+0.2
+0.7
carbon source
acetate (C)
N.D.
+0.2
-0.1
+0.1
-0.1
carbon source
D-Glucose (C)
N.D.
-0.2
-0.1
+0.2
+0.1
carbon source
acetate (C)
N.D.
-0.1
-0.1
+0.2
+0.2
carbon source
octanoate (C)
N.D.
+0.1
-0.1
+0.4
+0.3
carbon source
octanoate (C)
N.D.
-0.3
+0.5
+0.0
+0.3
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