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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
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Top 22 experiments (either direction), sorted by average fitness
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500 nt
yubM and yubL are separated by 65 nucleotides
yubL and ssb are separated by 57 nucleotides
ssb and NOLOHH_24295 are separated by 781 nucleotides
NOLOHH_24295 and NOLOHH_24300 overlap by 4 nucleotides
NOLOHH_24280: yubM - Uncharacterized protein YubM, at 7,480 to 9,444
yubM
NOLOHH_24285: yubL - UPF0401 protein YubL, at 9,510 to 9,743
yubL
NOLOHH_24290: ssb - single-stranded DNA-binding protein, at 9,801 to 10,328
ssb
NOLOHH_24295: NOLOHH_24295 - YffA, at 11,110 to 11,301
_24295
NOLOHH_24300: NOLOHH_24300 - Uncharacterized protein YubJ, at 11,298 to 11,792
_24300
Group
Condition
NOLOHH
_24280
NOLOHH
_24285
NOLOHH
_24290
NOLOHH
_24295
NOLOHH
_24300
yubM
yubL
ssb
carbon source
L-Arabinose
-0.1
N.D.
-1.8
-0.3
+0.5
carbon source
L-Rhamnose
-0.1
N.D.
-0.8
+0.3
-0.8
carbon source
Casamino-acids
-0.3
N.D.
-1.0
-0.3
+0.2
carbon source
L-Rhamnose
-0.3
N.D.
-0.8
-0.1
-0.2
carbon source
Sodium-DL-Lactate
-0.8
N.D.
-0.2
-0.4
+0.3
carbon source
Casamino-acids
-0.3
N.D.
-1.0
-0.2
+0.7
phage
RB49
+0.3
N.D.
-1.1
-0.0
+0.1
carbon source
Sodium-DL-Lactate
-0.3
N.D.
-0.8
+0.5
+0.0
carbon source
L-Arabinose
-0.2
N.D.
-0.0
-0.2
-0.1
no phage control
Control_ECOR27
+0.1
N.D.
-1.0
-0.2
+0.8
phage
TP12
+0.0
N.D.
-0.7
+0.2
+0.1
phage
Bas09
+0.4
N.D.
-0.4
+0.0
+0.1
carbon source
D-Glucose
-0.3
N.D.
+0.2
+0.4
-0.1
phage
Bas67
+0.3
N.D.
-0.7
+0.2
+0.6
phage
K5
+0.7
N.D.
-0.5
+0.4
-0.2
carbon source
D-Glucose
-0.2
N.D.
-0.0
+0.4
+0.4
phage
K5
+0.1
N.D.
+0.1
+0.4
+0.3
phage
Bas67
+0.3
N.D.
-0.7
+0.6
+0.6
phage
Bas69
+0.3
N.D.
+0.6
+0.3
-0.2
phage
TP7
+0.2
N.D.
-0.1
+0.5
+0.5
phage
TP12
+0.1
N.D.
-0.1
+0.6
+0.5
phage
TP2
+0.3
N.D.
+0.1
+0.6
+1.7
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