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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
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500 nt
tnp-IS3 and tnp-IS3 overlap by 4 nucleotides
tnp-IS3 and yhhI are separated by 93 nucleotides
yhhI and NOLOHH_24135 are separated by 44 nucleotides
NOLOHH_24135 and nrfB are separated by 167 nucleotides
NOLOHH_24120: tnp-IS3 - IS3 family IS3 transposase, at 4,755,214 to 4,755,513
tnp-IS3
NOLOHH_24125: tnp-IS3 - IS3 family transposase, at 4,755,510 to 4,756,376
tnp-IS3
NOLOHH_24130: yhhI - ISAs1 family transposase, at 4,756,470 to 4,757,327
yhhI
NOLOHH_24135: NOLOHH_24135 - H repeat-associated protein yhhi (Orf-h), at 4,757,372 to 4,757,428
_24135
NOLOHH_24140: nrfB - phage adsorption protein NrfB, at 4,757,596 to 4,759,833
nrfB
Group
Condition
NOLOHH
_24120
NOLOHH
_24125
NOLOHH
_24130
NOLOHH
_24135
NOLOHH
_24140
tnp-IS3
tnp-IS3
yhhI
nrfB
carbon source
L-Rhamnose
N.D.
N.D.
N.D.
N.D.
-0.3
carbon source
Sodium-DL-Lactate
N.D.
N.D.
N.D.
N.D.
-0.2
phage
TP12
N.D.
N.D.
N.D.
N.D.
-0.2
carbon source
Casamino-acids
N.D.
N.D.
N.D.
N.D.
-0.1
carbon source
L-Arabinose
N.D.
N.D.
N.D.
N.D.
-0.1
carbon source
L-Arabinose
N.D.
N.D.
N.D.
N.D.
-0.0
carbon source
D-Glucose
N.D.
N.D.
N.D.
N.D.
-0.0
carbon source
Sodium-DL-Lactate
N.D.
N.D.
N.D.
N.D.
+0.0
phage
K5
N.D.
N.D.
N.D.
N.D.
+0.0
carbon source
L-Rhamnose
N.D.
N.D.
N.D.
N.D.
+0.0
phage
TP12
N.D.
N.D.
N.D.
N.D.
+0.1
carbon source
D-Glucose
N.D.
N.D.
N.D.
N.D.
+0.1
carbon source
Casamino-acids
N.D.
N.D.
N.D.
N.D.
+0.1
phage
Bas67
N.D.
N.D.
N.D.
N.D.
+0.1
phage
Bas09
N.D.
N.D.
N.D.
N.D.
+0.2
phage
Bas67
N.D.
N.D.
N.D.
N.D.
+0.2
phage
TP7
N.D.
N.D.
N.D.
N.D.
+0.2
no phage control
Control_ECOR27
N.D.
N.D.
N.D.
N.D.
+0.4
phage
K5
N.D.
N.D.
N.D.
N.D.
+0.4
phage
RB49
N.D.
N.D.
N.D.
N.D.
+2.0
phage
TP2
N.D.
N.D.
N.D.
N.D.
+6.0
phage
Bas69
N.D.
N.D.
N.D.
N.D.
+7.2
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