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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
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Top 22 experiments (either direction), sorted by average fitness
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500 nt
ubiF and miaB are separated by 145 nucleotides
miaB and ybeZ are separated by 113 nucleotides
ybeZ and ybeY overlap by 4 nucleotides
ybeY and corC are separated by 89 nucleotides
NOLOHH_23600: ubiF - 3-demethoxyubiquinol 3-hydroxylase, at 4,642,832 to 4,644,007
ubiF
NOLOHH_23605: miaB - tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB, at 4,644,153 to 4,645,577
miaB
NOLOHH_23610: ybeZ - PhoH-like protein, at 4,645,691 to 4,646,770
ybeZ
NOLOHH_23615: ybeY - rRNA maturation RNase YbeY, at 4,646,767 to 4,647,234
ybeY
NOLOHH_23620: corC - CNNM family magnesium/cobalt transport protein CorC, at 4,647,324 to 4,648,202
corC
Group
Condition
NOLOHH
_23600
NOLOHH
_23605
NOLOHH
_23610
NOLOHH
_23615
NOLOHH
_23620
ubiF
miaB
ybeZ
ybeY
corC
phage
RB49
N.D.
-0.1
+0.1
N.D.
-0.6
phage
TP12
N.D.
+0.1
-0.0
N.D.
-0.6
phage
TP12
N.D.
-0.3
+0.0
N.D.
-0.0
carbon source
L-Arabinose
N.D.
+0.2
-0.4
N.D.
+0.0
phage
Bas09
N.D.
-0.1
+0.0
N.D.
+0.0
phage
TP2
N.D.
+0.2
+0.1
N.D.
-0.3
carbon source
D-Glucose
N.D.
-0.1
-0.1
N.D.
+0.2
no phage control
Control_ECOR27
N.D.
-0.4
+0.2
N.D.
+0.1
carbon source
Casamino-acids
N.D.
-0.1
-0.1
N.D.
+0.2
carbon source
Sodium-DL-Lactate
N.D.
-0.7
+0.1
N.D.
+0.6
phage
Bas67
N.D.
-0.2
+0.3
N.D.
-0.1
phage
TP7
N.D.
-0.5
+0.3
N.D.
+0.3
carbon source
Casamino-acids
N.D.
-0.0
-0.1
N.D.
+0.2
phage
Bas67
N.D.
-0.2
+0.1
N.D.
+0.3
phage
K5
N.D.
-0.2
+0.1
N.D.
+0.6
carbon source
L-Arabinose
N.D.
-0.3
+0.1
N.D.
+0.8
carbon source
D-Glucose
N.D.
-0.3
+0.2
N.D.
+0.7
carbon source
Sodium-DL-Lactate
N.D.
-0.3
-0.0
N.D.
+0.9
phage
K5
N.D.
+0.1
+0.2
N.D.
+0.3
phage
Bas69
N.D.
+2.1
+0.1
N.D.
-0.9
carbon source
L-Rhamnose
N.D.
-0.6
-0.2
N.D.
+2.3
carbon source
L-Rhamnose
N.D.
-0.6
-0.3
N.D.
+2.5
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