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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
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500 nt
odhB and sucA are separated by 14 nucleotides
sucA and sdhB are separated by 200 nucleotides
sdhB and sdhA are separated by 15 nucleotides
sdhA and sdhD overlap by 1 nucleotides
NOLOHH_23310: odhB - 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase, at 4,581,573 to 4,582,790
odhB
NOLOHH_23315: sucA - 2-oxoglutarate dehydrogenase E1 component, at 4,582,805 to 4,585,606
sucA
NOLOHH_23320: sdhB - succinate dehydrogenase iron-sulfur subunit SdhB, at 4,585,807 to 4,586,523
sdhB
NOLOHH_23325: sdhA - succinate dehydrogenase flavoprotein subunit, at 4,586,539 to 4,588,305
sdhA
NOLOHH_23330: sdhD - succinate dehydrogenase membrane anchor subunit, at 4,588,305 to 4,588,652
sdhD
Group
Condition
NOLOHH
_23310
NOLOHH
_23315
NOLOHH
_23320
NOLOHH
_23325
NOLOHH
_23330
odhB
sucA
sdhB
sdhA
sdhD
carbon source
Casamino-acids
-5.4
-4.1
-3.5
-3.3
-2.2
carbon source
Casamino-acids
-4.6
-3.6
-3.5
-3.6
-1.4
carbon source
Sodium-DL-Lactate
-5.4
-2.1
-1.8
-0.6
-0.9
carbon source
L-Rhamnose
-5.0
-3.9
-0.6
-0.6
-0.4
carbon source
Sodium-DL-Lactate
-5.3
-3.0
-1.1
-0.6
-0.2
carbon source
D-Glucose
-5.6
-4.3
-0.2
+0.1
+0.5
carbon source
D-Glucose
-5.0
-3.9
+0.2
+0.1
+0.4
carbon source
L-Arabinose
-4.0
-3.2
-1.0
-0.1
+0.4
carbon source
L-Rhamnose
-5.0
-1.8
+0.1
-0.3
-0.3
carbon source
L-Arabinose
-4.6
-0.7
+0.3
-1.1
+0.6
phage
TP2
-1.9
-2.0
+0.1
-0.6
-0.2
no phage control
Control_ECOR27
-1.6
-1.2
+0.2
-0.4
-0.4
phage
K5
-2.1
-1.9
+0.5
+0.3
-0.1
phage
RB49
-2.1
-0.3
-0.2
-0.3
-0.2
phage
Bas69
-1.6
-1.8
+0.2
+0.3
+0.0
phage
Bas09
-0.3
-1.3
-0.3
-0.6
-0.4
phage
TP12
-0.7
-1.9
+0.3
-0.4
-0.0
phage
TP12
-1.5
-1.2
+0.1
-0.1
+0.0
phage
Bas67
-1.6
-0.5
+0.4
-0.3
-0.3
phage
TP7
-1.2
-1.3
+0.5
+0.4
+0.1
phage
Bas67
-0.2
-1.4
+0.4
-0.3
+0.0
phage
K5
-2.0
-0.6
+0.4
+0.5
+0.3
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