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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
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500 nt
cobB and nagK are separated by 15 nucleotides
nagK and lolE are separated by 28 nucleotides
lolE and lolD are separated by 5 nucleotides
lolD and lolC overlap by 8 nucleotides
NOLOHH_20965: cobB - NAD-dependent protein deacylase, at 4,123,719 to 4,124,540
cobB
NOLOHH_20970: nagK - N-acetylglucosamine kinase, at 4,124,556 to 4,125,467
nagK
NOLOHH_20975: lolE - lipoprotein-releasing ABC transporter permease subunit LolE, at 4,125,496 to 4,126,734
lolE
NOLOHH_20980: lolD - lipoprotein-releasing ABC transporter ATP-binding protein LolD, at 4,126,740 to 4,127,441
lolD
NOLOHH_20985: lolC - lipoprotein-releasing ABC transporter permease subunit LolC, at 4,127,434 to 4,128,633
lolC
Group
Condition
NOLOHH
_20965
NOLOHH
_20970
NOLOHH
_20975
NOLOHH
_20980
NOLOHH
_20985
cobB
nagK
lolE
lolD
lolC
phage
TP12
-0.0
-1.4
N.D.
N.D.
N.D.
phage
TP7
-0.4
-0.9
N.D.
N.D.
N.D.
phage
TP12
-0.2
-1.1
N.D.
N.D.
N.D.
carbon source
L-Rhamnose
-0.7
-0.5
N.D.
N.D.
N.D.
phage
Bas69
-0.4
-0.4
N.D.
N.D.
N.D.
phage
TP2
-0.3
-0.6
N.D.
N.D.
N.D.
carbon source
D-Glucose
-0.5
-0.1
N.D.
N.D.
N.D.
phage
Bas67
+0.1
-0.7
N.D.
N.D.
N.D.
carbon source
L-Arabinose
+0.3
-0.7
N.D.
N.D.
N.D.
carbon source
Casamino-acids
-0.9
+0.5
N.D.
N.D.
N.D.
phage
K5
-0.2
-0.1
N.D.
N.D.
N.D.
carbon source
Sodium-DL-Lactate
-0.0
-0.2
N.D.
N.D.
N.D.
no phage control
Control_ECOR27
+0.3
-0.3
N.D.
N.D.
N.D.
phage
Bas67
-0.1
+0.0
N.D.
N.D.
N.D.
carbon source
L-Arabinose
+0.2
-0.2
N.D.
N.D.
N.D.
carbon source
Casamino-acids
-0.1
+0.1
N.D.
N.D.
N.D.
carbon source
Sodium-DL-Lactate
-0.1
+0.3
N.D.
N.D.
N.D.
carbon source
D-Glucose
+0.2
+0.1
N.D.
N.D.
N.D.
phage
RB49
+0.1
+0.2
N.D.
N.D.
N.D.
carbon source
L-Rhamnose
+0.2
+0.1
N.D.
N.D.
N.D.
phage
K5
+0.1
+0.4
N.D.
N.D.
N.D.
phage
Bas09
+0.4
+0.5
N.D.
N.D.
N.D.
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