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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
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500 nt
hflD and purB are separated by 3 nucleotides
purB and phoP are separated by 167 nucleotides
phoP and phoQ overlap by 1 nucleotides
phoQ and roxA are separated by 75 nucleotides
NOLOHH_20905: hflD - high frequency lysogenization protein HflD, at 4,111,329 to 4,111,970
hflD
NOLOHH_20910: purB - adenylosuccinate lyase, at 4,111,974 to 4,113,344
purB
NOLOHH_20915: phoP - two-component system response regulator PhoP, at 4,113,512 to 4,114,183
phoP
NOLOHH_20920: phoQ - two-component system sensor histidine kinase PhoQ, at 4,114,183 to 4,115,643
phoQ
NOLOHH_20925: roxA - [50S ribosomal protein L16]-arginine 3-hydroxylase, at 4,115,719 to 4,116,840
roxA
Group
Condition
NOLOHH
_20905
NOLOHH
_20910
NOLOHH
_20915
NOLOHH
_20920
NOLOHH
_20925
hflD
purB
phoP
phoQ
roxA
phage
K5
-0.1
N.D.
-2.5
-1.4
-0.6
phage
Bas69
+0.8
N.D.
-2.1
-2.0
-1.2
phage
K5
+0.3
N.D.
-2.5
-1.9
-0.3
carbon source
Sodium-DL-Lactate
+0.5
N.D.
-3.0
-1.3
+0.1
carbon source
Casamino-acids
-1.2
N.D.
-1.1
-0.8
+0.0
carbon source
L-Rhamnose
+0.5
N.D.
-1.6
-1.5
-0.1
carbon source
Casamino-acids
-3.1
N.D.
-0.3
+0.3
+0.5
phage
TP2
+0.5
N.D.
-2.3
-0.5
+0.0
phage
Bas67
-0.6
N.D.
-1.1
+0.1
-0.6
carbon source
Sodium-DL-Lactate
-0.5
N.D.
-0.4
-0.9
-0.2
phage
TP12
+0.0
N.D.
-2.0
+0.6
-0.6
phage
Bas09
-1.1
N.D.
-1.7
+0.8
+0.2
carbon source
L-Rhamnose
+0.7
N.D.
-0.4
-2.2
+0.2
phage
TP7
-0.8
N.D.
-0.8
+0.5
-0.3
carbon source
L-Arabinose
+0.5
N.D.
-2.0
+0.4
-0.1
phage
Bas67
-0.8
N.D.
-0.6
+0.7
-0.1
carbon source
L-Arabinose
+0.6
N.D.
+0.2
-1.1
-0.5
carbon source
D-Glucose
+0.4
N.D.
-0.3
-0.2
-0.5
no phage control
Control_ECOR27
+0.3
N.D.
-0.4
+0.5
-0.7
phage
TP12
+0.4
N.D.
-1.2
+1.1
+0.0
carbon source
D-Glucose
+2.4
N.D.
-0.4
-0.8
-0.6
phage
RB49
-0.5
N.D.
+0.3
+1.0
+0.0
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