Fitness for 5 genes in Escherichia coli ECOR27

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500 nticd and rluE are separated by 171 nucleotidesrluE and nudJ are separated by 9 nucleotidesnudJ and mnmA are separated by 53 nucleotidesmnmA and hflD are separated by 35 nucleotides NOLOHH_20885: icd - NADP-dependent isocitrate dehydrogenase, at 4,107,587 to 4,108,837 icd NOLOHH_20890: rluE - 23S rRNA pseudouridine(2457) synthase RluE, at 4,109,009 to 4,109,662 rluE NOLOHH_20895: nudJ - phosphatase NudJ, at 4,109,672 to 4,110,133 nudJ NOLOHH_20900: mnmA - tRNA 2-thiouridine(34) synthase MnmA, at 4,110,187 to 4,111,293 mnmA NOLOHH_20905: hflD - high frequency lysogenization protein HflD, at 4,111,329 to 4,111,970 hflD
Group Condition NOLOHH_20885 NOLOHH_20890 NOLOHH_20895 NOLOHH_20900 NOLOHH_20905
icd rluE nudJ mnmA hflD
carbon source L-Arabinose N.D. +0.2 -5.1 N.D. +0.5
phage TP12 N.D. +0.3 -3.2 N.D. +0.0
phage Bas69 N.D. -0.5 -3.1 N.D. +0.8
phage Bas09 N.D. -0.1 -1.5 N.D. -1.1
phage K5 N.D. +0.2 -3.2 N.D. +0.3
carbon source Casamino-acids N.D. -0.1 +0.9 N.D. -3.1
phage K5 N.D. -0.0 -1.9 N.D. -0.1
carbon source Casamino-acids N.D. -0.1 -0.7 N.D. -1.2
phage Bas67 N.D. +0.1 -0.5 N.D. -0.8
phage RB49 N.D. +0.3 -0.9 N.D. -0.5
phage TP2 N.D. -0.2 -1.3 N.D. +0.5
carbon source Sodium-DL-Lactate N.D. -0.4 -0.0 N.D. -0.5
phage Bas67 N.D. +0.2 -0.3 N.D. -0.6
phage TP7 N.D. +0.3 -0.1 N.D. -0.8
carbon source L-Arabinose N.D. +0.0 -0.9 N.D. +0.6
phage TP12 N.D. +0.2 -0.1 N.D. +0.4
carbon source Sodium-DL-Lactate N.D. +0.5 -0.4 N.D. +0.5
no phage control Control_ECOR27 N.D. +0.4 -0.1 N.D. +0.3
carbon source D-Glucose N.D. +0.2 +0.1 N.D. +0.4
carbon source L-Rhamnose N.D. -0.1 +0.4 N.D. +0.7
carbon source L-Rhamnose N.D. +0.0 +0.6 N.D. +0.5
carbon source D-Glucose N.D. +0.4 +1.4 N.D. +2.4
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