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Fitness for 5 genes in
Escherichia coli ECOR27
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500 nt
ydeU and NOLOHH_18840 are separated by 27 nucleotides
NOLOHH_18840 and hipB are separated by 88 nucleotides
hipB and hipA overlap by 1 nucleotides
hipA and fimA are separated by 952 nucleotides
NOLOHH_18835: ydeU - ECSE_1600 family autotransporter, at 3,686,991 to 3,692,411
ydeU
NOLOHH_18840: NOLOHH_18840 - hypothetical protein, at 3,692,439 to 3,692,531
_18840
NOLOHH_18845: hipB - type II toxin-antitoxin system antitoxin HipB, at 3,692,620 to 3,692,886
hipB
NOLOHH_18850: hipA - type II toxin-antitoxin system serine/threonine protein kinase toxin HipA, at 3,692,886 to 3,694,208
hipA
NOLOHH_18855: fimA - type 1 fimbrial major subunit FimA, at 3,695,161 to 3,695,724
fimA
Group
Condition
NOLOHH
_18835
NOLOHH
_18840
NOLOHH
_18845
NOLOHH
_18850
NOLOHH
_18855
ydeU
hipB
hipA
fimA
carbon source
L-Rhamnose
+0.1
N.D.
N.D.
N.D.
-5.0
carbon source
D-Glucose
-0.1
N.D.
N.D.
N.D.
-3.5
carbon source
Sodium-DL-Lactate
-0.2
N.D.
N.D.
N.D.
-1.2
carbon source
L-Rhamnose
+0.2
N.D.
N.D.
N.D.
-1.2
phage
TP7
-0.1
N.D.
N.D.
N.D.
-0.7
phage
TP12
-0.5
N.D.
N.D.
N.D.
-0.2
carbon source
D-Glucose
+0.0
N.D.
N.D.
N.D.
-0.7
carbon source
Casamino-acids
+0.1
N.D.
N.D.
N.D.
-0.6
phage
Bas09
+0.0
N.D.
N.D.
N.D.
-0.5
carbon source
Sodium-DL-Lactate
-0.1
N.D.
N.D.
N.D.
-0.4
carbon source
Casamino-acids
-0.1
N.D.
N.D.
N.D.
-0.3
carbon source
L-Arabinose
+0.2
N.D.
N.D.
N.D.
-0.3
phage
Bas67
-0.2
N.D.
N.D.
N.D.
+0.1
phage
Bas67
-0.2
N.D.
N.D.
N.D.
+0.1
phage
K5
-0.2
N.D.
N.D.
N.D.
+0.3
phage
TP2
-0.1
N.D.
N.D.
N.D.
+0.4
phage
TP12
-0.1
N.D.
N.D.
N.D.
+0.8
phage
K5
-0.3
N.D.
N.D.
N.D.
+1.0
phage
Bas69
-0.0
N.D.
N.D.
N.D.
+0.8
no phage control
Control_ECOR27
+0.0
N.D.
N.D.
N.D.
+0.9
phage
RB49
+0.1
N.D.
N.D.
N.D.
+1.1
carbon source
L-Arabinose
+0.1
N.D.
N.D.
N.D.
+1.5
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