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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
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500 nt
ydfJ and ydfI are separated by 88 nucleotides
ydfI and ydfZ are separated by 35 nucleotides
ydfZ and ydfH are separated by 177 nucleotides
ydfH and ydfG are separated by 88 nucleotides
NOLOHH_18620: ydfJ - Putative transporter YdfJ, at 3,646,045 to 3,647,328
ydfJ
NOLOHH_18625: ydfI - Uncharacterized oxidoreductase YdfI, at 3,647,417 to 3,648,877
ydfI
NOLOHH_18630: ydfZ - Putative selenoprotein YdfZ, at 3,648,913 to 3,649,116
ydfZ
NOLOHH_18635: ydfH - DNA-binding transcriptional regulator YdfH, at 3,649,294 to 3,649,980
ydfH
NOLOHH_18640: ydfG - bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG, at 3,650,069 to 3,650,815
ydfG
Group
Condition
NOLOHH
_18620
NOLOHH
_18625
NOLOHH
_18630
NOLOHH
_18635
NOLOHH
_18640
ydfJ
ydfI
ydfZ
ydfH
ydfG
carbon source
Casamino-acids
-2.0
-1.1
N.D.
N.D.
N.D.
phage
TP2
-0.9
-1.2
N.D.
N.D.
N.D.
carbon source
L-Rhamnose
-1.5
-0.5
N.D.
N.D.
N.D.
carbon source
L-Arabinose
-1.3
-0.7
N.D.
N.D.
N.D.
phage
TP12
-0.8
-0.3
N.D.
N.D.
N.D.
carbon source
Casamino-acids
-1.0
+0.3
N.D.
N.D.
N.D.
phage
Bas09
-0.1
-0.1
N.D.
N.D.
N.D.
phage
Bas67
+0.1
-0.3
N.D.
N.D.
N.D.
carbon source
L-Arabinose
-0.2
+0.3
N.D.
N.D.
N.D.
phage
Bas69
-0.7
+0.8
N.D.
N.D.
N.D.
carbon source
Sodium-DL-Lactate
+0.1
+0.1
N.D.
N.D.
N.D.
carbon source
D-Glucose
-0.0
+0.2
N.D.
N.D.
N.D.
carbon source
D-Glucose
+0.4
-0.2
N.D.
N.D.
N.D.
carbon source
L-Rhamnose
+0.5
+0.1
N.D.
N.D.
N.D.
phage
TP7
+1.2
-0.6
N.D.
N.D.
N.D.
phage
Bas67
+1.0
-0.2
N.D.
N.D.
N.D.
phage
K5
+1.3
-0.5
N.D.
N.D.
N.D.
carbon source
Sodium-DL-Lactate
+0.6
+0.2
N.D.
N.D.
N.D.
phage
TP12
+0.8
+0.1
N.D.
N.D.
N.D.
phage
RB49
+1.7
-0.3
N.D.
N.D.
N.D.
phage
K5
+1.0
+0.5
N.D.
N.D.
N.D.
no phage control
Control_ECOR27
+1.5
+0.2
N.D.
N.D.
N.D.
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