Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 22 experiments (either direction), sorted by average fitness
Or view
all 22 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
astA and astD overlap by 4 nucleotides
astD and astB overlap by 4 nucleotides
astB and astE overlap by 8 nucleotides
astE and spy are separated by 329 nucleotides
NOLOHH_17425: astA - arginine N-succinyltransferase, at 3,421,161 to 3,422,195
astA
NOLOHH_17430: astD - succinylglutamate-semialdehyde dehydrogenase, at 3,422,192 to 3,423,670
astD
NOLOHH_17435: astB - N-succinylarginine dihydrolase, at 3,423,667 to 3,425,010
astB
NOLOHH_17440: astE - succinylglutamate desuccinylase, at 3,425,003 to 3,425,971
astE
NOLOHH_17445: spy - ATP-independent periplasmic protein-refolding chaperone Spy, at 3,426,301 to 3,426,786
spy
Group
Condition
NOLOHH
_17425
NOLOHH
_17430
NOLOHH
_17435
NOLOHH
_17440
NOLOHH
_17445
astA
astD
astB
astE
spy
carbon source
L-Arabinose
-0.2
-1.1
+0.3
-5.7
N.D.
phage
TP12
-0.0
-0.2
-3.0
-1.8
N.D.
phage
Bas67
-1.2
-0.0
-2.0
-0.5
N.D.
phage
Bas09
+0.2
-0.3
-0.3
-3.0
N.D.
carbon source
Casamino-acids
-0.9
-0.3
+0.0
-2.3
N.D.
phage
Bas69
-0.5
-0.1
-0.2
-2.3
N.D.
phage
TP2
-0.4
-0.1
-2.9
+0.3
N.D.
phage
K5
-0.1
+0.4
-1.1
-2.1
N.D.
carbon source
L-Rhamnose
-1.2
-1.1
+0.8
-0.6
N.D.
phage
RB49
-1.3
+0.2
-0.5
-0.4
N.D.
phage
K5
+0.6
-0.0
-1.2
-1.0
N.D.
carbon source
L-Arabinose
-1.2
+0.3
-0.7
+0.2
N.D.
no phage control
Control_ECOR27
+0.6
-0.8
-0.9
-0.2
N.D.
phage
TP7
+0.3
-0.2
-1.3
+0.1
N.D.
phage
Bas67
+0.2
+1.0
-0.9
-1.2
N.D.
carbon source
D-Glucose
-0.7
-0.1
-0.1
+0.4
N.D.
carbon source
Sodium-DL-Lactate
+0.0
-0.2
+0.2
-0.2
N.D.
carbon source
D-Glucose
+0.1
-0.3
+0.7
-0.2
N.D.
carbon source
Sodium-DL-Lactate
+0.3
+0.3
+1.0
-0.2
N.D.
carbon source
Casamino-acids
-0.3
+0.6
+0.3
+0.8
N.D.
carbon source
L-Rhamnose
-0.6
-0.4
+1.2
+1.3
N.D.
phage
TP12
+0.5
+0.8
+0.1
+0.2
N.D.
remove
NOLOHH_17425
plot
remove
NOLOHH_17430
plot
remove
NOLOHH_17435
remove
NOLOHH_17440
plot
remove
NOLOHH_17445
plot