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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
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500 nt
yedP and yodD are separated by 297 nucleotides
yodD and dsrB are separated by 162 nucleotides
dsrB and rcsA are separated by 43 nucleotides
rcsA and fliR are separated by 289 nucleotides
NOLOHH_16260: yedP - mannosyl-3-phosphoglycerate phosphatase-related protein, at 3,206,986 to 3,207,801
yedP
NOLOHH_16270: yodD - YodD family peroxide/acid resistance protein, at 3,208,099 to 3,208,326
yodD
NOLOHH_16275: dsrB - protein DsrB, at 3,208,489 to 3,208,677
dsrB
NOLOHH_16280: rcsA - transcriptional regulator RcsA, at 3,208,721 to 3,209,344
rcsA
NOLOHH_16285: fliR - flagellar type III secretion system protein FliR, at 3,209,634 to 3,210,419
fliR
Group
Condition
NOLOHH
_16260
NOLOHH
_16270
NOLOHH
_16275
NOLOHH
_16280
NOLOHH
_16285
yedP
yodD
dsrB
rcsA
fliR
carbon source
L-Arabinose
-0.2
-0.2
-0.1
N.D.
-3.3
phage
TP2
-1.1
+0.3
-0.6
N.D.
-0.2
phage
Bas69
-0.5
+0.5
-0.5
N.D.
-0.8
phage
TP7
-0.9
-0.4
-0.1
N.D.
+0.3
carbon source
Casamino-acids
+0.4
-0.0
+0.2
N.D.
-1.4
carbon source
L-Arabinose
+0.1
-0.9
-0.3
N.D.
+0.4
carbon source
Sodium-DL-Lactate
-0.1
+0.1
-0.4
N.D.
-0.2
phage
RB49
+0.1
+0.5
-0.7
N.D.
-0.3
phage
Bas67
+0.3
-0.6
+0.5
N.D.
-0.5
carbon source
D-Glucose
-0.6
+0.3
+0.4
N.D.
-0.4
carbon source
Casamino-acids
-0.1
-0.0
-0.2
N.D.
+0.4
carbon source
L-Rhamnose
-0.3
-0.0
+0.2
N.D.
+0.4
phage
TP12
+0.1
+0.3
-0.6
N.D.
+0.8
carbon source
Sodium-DL-Lactate
+0.5
-0.3
+0.0
N.D.
+0.5
phage
K5
+0.2
+0.4
-0.6
N.D.
+0.8
carbon source
D-Glucose
+0.7
+0.3
+0.3
N.D.
-0.2
no phage control
Control_ECOR27
-0.3
+0.0
+0.9
N.D.
+0.5
phage
Bas67
+0.3
+0.0
+0.3
N.D.
+0.8
phage
Bas09
+0.5
+0.1
+0.8
N.D.
+0.4
phage
K5
+0.4
+0.4
+0.8
N.D.
+0.2
phage
TP12
-0.2
+0.3
+1.1
N.D.
+0.9
carbon source
L-Rhamnose
+0.7
+0.2
+0.7
N.D.
+0.7
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