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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
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Top 22 experiments (either direction), sorted by average fitness
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500 nt
Asn_trna and nac are separated by 326 nucleotides
nac and cbl are separated by 101 nucleotides
cbl and NOLOHH_16070 are separated by 423 nucleotides
NOLOHH_16070 and NOLOHH_16075 overlap by 4 nucleotides
NOLOHH_16055: Asn_trna - tRNA-Asn(gtt), at 3,155,711 to 3,155,786
_trna
NOLOHH_16060: nac - nitrogen assimilation transcriptional regulator NAC, at 3,156,113 to 3,157,030
nac
NOLOHH_16065: cbl - HTH-type transcriptional regulator Cbl, at 3,157,132 to 3,158,082
cbl
NOLOHH_16070: NOLOHH_16070 - ATP-binding protein, at 3,158,506 to 3,160,797
_16070
NOLOHH_16075: NOLOHH_16075 - HNH endonuclease, at 3,160,794 to 3,161,720
_16075
Group
Condition
NOLOHH
_16055
NOLOHH
_16060
NOLOHH
_16065
NOLOHH
_16070
NOLOHH
_16075
Asn_trna
nac
cbl
carbon source
L-Rhamnose
N.D.
N.D.
+0.1
-1.4
-3.1
carbon source
L-Arabinose
N.D.
N.D.
-0.3
+0.2
-2.8
carbon source
L-Rhamnose
N.D.
N.D.
-0.2
-0.7
-0.4
carbon source
Sodium-DL-Lactate
N.D.
N.D.
-0.4
+0.1
-0.0
phage
TP7
N.D.
N.D.
+0.5
-0.0
-0.6
phage
K5
N.D.
N.D.
-0.1
+0.0
-0.1
phage
TP12
N.D.
N.D.
+0.2
+0.1
-0.3
phage
K5
N.D.
N.D.
+0.1
+0.1
-0.2
carbon source
Sodium-DL-Lactate
N.D.
N.D.
-0.4
+0.1
+0.4
carbon source
D-Glucose
N.D.
N.D.
-0.6
+0.3
+0.3
no phage control
Control_ECOR27
N.D.
N.D.
-0.1
+0.4
-0.2
phage
Bas67
N.D.
N.D.
-0.0
+0.2
+0.1
phage
Bas09
N.D.
N.D.
+0.0
+0.3
-0.0
carbon source
D-Glucose
N.D.
N.D.
-0.6
+0.4
+0.7
phage
Bas67
N.D.
N.D.
-0.0
+0.2
+0.2
phage
RB49
N.D.
N.D.
+0.3
+0.3
-0.1
phage
TP2
N.D.
N.D.
+0.3
+0.4
+0.0
carbon source
Casamino-acids
N.D.
N.D.
-0.1
+0.0
+0.8
phage
TP12
N.D.
N.D.
-0.0
+0.3
+0.6
carbon source
L-Arabinose
N.D.
N.D.
-0.4
+0.4
+1.0
carbon source
Casamino-acids
N.D.
N.D.
+0.3
+0.1
+0.7
phage
Bas69
N.D.
N.D.
-0.1
+0.2
+1.4
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