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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
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Top 22 experiments (either direction), sorted by average fitness
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500 nt
rcnB and rcnA are separated by 218 nucleotides
rcnA and rcnR are separated by 120 nucleotides
rcnR and NOLOHH_15355 are separated by 256 nucleotides
NOLOHH_15355 and NOLOHH_15360 are separated by 119 nucleotides
NOLOHH_15340: rcnB - Ni(II)/Co(II) efflux transporter accessory subunit RcnB, at 3,017,721 to 3,018,059
rcnB
NOLOHH_15345: rcnA - nickel/cobalt efflux protein RcnA, at 3,018,278 to 3,019,102
rcnA
NOLOHH_15350: rcnR - Ni(II)/Co(II)-binding transcriptional repressor RcnR, at 3,019,223 to 3,019,495
rcnR
NOLOHH_15355: NOLOHH_15355 - Site-specific recombinase, phage integrase family, at 3,019,752 to 3,021,110
_15355
NOLOHH_15360: NOLOHH_15360 - hypothetical protein, at 3,021,230 to 3,021,499
_15360
Group
Condition
NOLOHH
_15340
NOLOHH
_15345
NOLOHH
_15350
NOLOHH
_15355
NOLOHH
_15360
rcnB
rcnA
rcnR
carbon source
L-Arabinose
-0.1
-0.1
-3.7
+0.3
+0.3
phage
K5
-0.0
-0.4
-1.1
-0.2
-0.2
phage
Bas09
+0.2
-0.3
-1.3
-0.0
-0.3
phage
RB49
+0.2
+0.0
-1.7
+0.1
-0.2
carbon source
D-Glucose
-0.2
+1.1
-1.9
-0.4
+0.0
phage
TP7
-0.4
-0.3
+0.1
-0.0
-0.7
phage
Bas69
+0.1
+0.2
-1.7
+0.4
-0.3
carbon source
L-Rhamnose
-0.0
-1.0
+0.4
-0.1
-0.3
no phage control
Control_ECOR27
-0.7
-0.7
+0.2
+0.0
+0.0
carbon source
Casamino-acids
-0.3
+0.4
-0.7
-0.3
-0.1
carbon source
Casamino-acids
-0.0
-0.3
+0.2
-0.1
-0.3
phage
Bas67
+0.0
-0.2
-0.0
+0.0
+0.0
phage
TP12
-0.4
+0.2
-0.1
+0.2
+0.0
phage
Bas67
+0.4
+0.1
-0.3
-0.0
-0.3
carbon source
Sodium-DL-Lactate
+0.4
+0.1
-0.3
+0.1
-0.3
phage
K5
-0.1
-0.1
+0.1
+0.3
-0.1
carbon source
D-Glucose
-0.0
-0.2
+0.5
-0.1
-0.0
carbon source
Sodium-DL-Lactate
+0.1
+0.0
+0.3
+0.1
-0.2
phage
TP12
+0.2
+0.3
+0.1
-0.2
-0.0
phage
TP2
-0.1
+0.3
-0.2
+0.5
+0.1
carbon source
L-Rhamnose
+0.1
-0.4
+1.0
-0.5
+0.5
carbon source
L-Arabinose
+0.6
+0.5
+0.0
+0.0
-0.0
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