Fitness for 5 genes in Escherichia coli ECOR27

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500 ntypfH and ypfN are separated by 109 nucleotidesypfN and dapE are separated by 27 nucleotidesdapE and arsC are separated by 3 nucleotidesarsC and ypfM are separated by 380 nucleotides NOLOHH_13615: ypfH - esterase, at 2,644,986 to 2,645,684 ypfH NOLOHH_13630: ypfN - UPF0370 protein YpfN, at 2,645,794 to 2,645,994 ypfN NOLOHH_13635: dapE - succinyl-diaminopimelate desuccinylase, at 2,646,022 to 2,647,149 dapE NOLOHH_13640: arsC - ArsC family reductase, at 2,647,153 to 2,647,509 arsC NOLOHH_13645: ypfM - protein YpfM, at 2,647,890 to 2,647,949 ypfM
Group Condition NOLOHH_13615 NOLOHH_13630 NOLOHH_13635 NOLOHH_13640 NOLOHH_13645
ypfH ypfN dapE arsC ypfM
phage TP2 -1.4 -3.1 N.D. -2.0 -0.0
carbon source L-Arabinose +0.1 -1.0 N.D. -2.8 -1.1
carbon source Casamino-acids +0.3 -2.0 N.D. -1.0 -0.3
phage TP12 -0.1 -1.3 N.D. -0.5 -0.1
carbon source Sodium-DL-Lactate +0.2 -0.5 N.D. -0.6 -1.0
carbon source L-Rhamnose +0.2 +0.4 N.D. -2.3 +0.2
carbon source L-Rhamnose +0.5 -1.4 N.D. -0.1 -0.5
phage K5 +0.1 -1.3 N.D. -0.0 -0.1
phage K5 -0.7 +0.1 N.D. -1.1 +0.4
phage Bas69 -0.6 -0.0 N.D. -0.7 +0.6
phage RB49 -0.1 -0.2 N.D. -0.3 -0.0
phage Bas09 +0.0 -0.8 N.D. +0.1 +0.2
carbon source L-Arabinose -0.1 -2.1 N.D. +0.9 +0.8
phage TP12 -0.3 -0.7 N.D. +0.5 +0.3
phage Bas67 -0.0 +0.2 N.D. +0.2 -0.4
carbon source D-Glucose +0.7 -1.9 N.D. +1.0 +0.1
carbon source Casamino-acids -0.1 +0.0 N.D. +0.2 -0.0
no phage control Control_ECOR27 -0.0 -0.6 N.D. -0.2 +1.1
carbon source D-Glucose +0.3 +0.8 N.D. -0.7 +0.2
phage TP7 -0.3 +0.2 N.D. +0.2 +0.9
phage Bas67 -0.2 +0.2 N.D. +0.4 +1.3
carbon source Sodium-DL-Lactate +0.4 +0.7 N.D. +0.6 +0.3
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