Fitness for 5 genes in Escherichia coli ECOR27

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500 ntvapB and vapC overlap by 1 nucleotidesvapC and ypfJ are separated by 146 nucleotidesypfJ and tmcA are separated by 14 nucleotidestmcA and ypfH are separated by 73 nucleotides NOLOHH_13595: vapB - toxin-antitoxin system antitoxin VapB, at 2,641,208 to 2,641,474 vapB NOLOHH_13600: vapC - VapC toxin family PIN domain ribonuclease, at 2,641,474 to 2,641,872 vapC NOLOHH_13605: ypfJ - Uncharacterized protein YpfJ, at 2,642,019 to 2,642,882 ypfJ NOLOHH_13610: tmcA - tRNA cytosine(34) acetyltransferase TmcA, at 2,642,897 to 2,644,912 tmcA NOLOHH_13615: ypfH - esterase, at 2,644,986 to 2,645,684 ypfH
Group Condition NOLOHH_13595 NOLOHH_13600 NOLOHH_13605 NOLOHH_13610 NOLOHH_13615
vapB vapC ypfJ tmcA ypfH
carbon source Casamino-acids -0.6 -0.9 +0.1 -0.6 +0.3
phage K5 -0.5 -0.2 -0.1 -0.0 -0.7
phage Bas67 -0.6 +0.1 -0.2 +0.1 -0.0
carbon source L-Arabinose -0.4 -0.5 +0.4 +0.1 -0.1
phage TP12 -0.1 +0.1 -0.0 -0.1 -0.3
phage TP7 -0.1 -0.4 +0.2 +0.2 -0.3
phage Bas67 +0.4 -0.3 -0.3 +0.1 -0.2
phage TP2 +0.3 +0.0 +0.1 +0.8 -1.4
no phage control Control_ECOR27 +0.2 -0.2 +0.0 -0.1 -0.0
phage K5 +0.5 -0.2 -0.1 -0.4 +0.1
phage Bas09 +0.2 -0.4 +0.0 +0.2 +0.0
phage RB49 +0.3 -0.3 +0.1 +0.1 -0.1
phage TP12 +0.1 -0.2 -0.0 +0.2 -0.1
carbon source D-Glucose -0.2 -0.1 +0.0 +0.1 +0.3
carbon source Sodium-DL-Lactate +0.1 -0.1 -0.0 -0.2 +0.4
carbon source Sodium-DL-Lactate +0.0 -0.0 +0.1 +0.1 +0.2
carbon source L-Rhamnose +0.6 -0.1 -0.1 -0.1 +0.2
phage Bas69 +0.3 +0.2 +0.0 +0.5 -0.6
carbon source Casamino-acids +0.5 -0.2 +0.1 +0.3 -0.1
carbon source L-Rhamnose +0.3 -0.3 +0.0 +0.0 +0.5
carbon source L-Arabinose +0.6 -0.1 +0.6 +0.4 +0.1
carbon source D-Glucose +0.4 +0.1 -0.0 +0.5 +0.7
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