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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
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500 nt
sseA and yfhM are separated by 206 nucleotides
yfhM and pbpC are separated by 0 nucleotides
pbpC and ndk are separated by 148 nucleotides
ndk and rlmN are separated by 149 nucleotides
NOLOHH_13340: sseA - 3-mercaptopyruvate sulfurtransferase, at 2,584,616 to 2,585,461
sseA
NOLOHH_13345: yfhM - alpha2-macroglobulin, at 2,585,668 to 2,590,629
yfhM
NOLOHH_13350: pbpC - peptidoglycan glycosyltransferase PbpC, at 2,590,630 to 2,592,942
pbpC
NOLOHH_13355: ndk - nucleoside-diphosphate kinase, at 2,593,091 to 2,593,522
ndk
NOLOHH_13360: rlmN - bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN, at 2,593,672 to 2,594,826
rlmN
Group
Condition
NOLOHH
_13340
NOLOHH
_13345
NOLOHH
_13350
NOLOHH
_13355
NOLOHH
_13360
sseA
yfhM
pbpC
ndk
rlmN
phage
RB49
-0.4
-0.0
+0.2
-1.5
+0.1
carbon source
Casamino-acids
-0.1
-0.1
-0.0
-1.4
+0.1
phage
TP12
+0.0
-0.0
-0.1
-1.3
-0.0
phage
K5
-0.1
-0.0
+0.3
-1.7
+0.0
carbon source
D-Glucose
+0.0
-0.1
+0.1
-1.4
+0.1
carbon source
L-Arabinose
-0.1
-0.0
-0.2
-0.8
-0.0
phage
TP2
-0.3
-0.2
-0.1
-0.4
+0.0
phage
Bas69
-0.2
+0.1
+0.0
-0.8
-0.0
phage
K5
+0.2
+0.0
+0.2
-1.3
-0.0
phage
TP12
+0.2
-0.0
-0.1
-1.0
-0.0
carbon source
Casamino-acids
+0.1
-0.1
-0.1
-0.7
+0.0
carbon source
L-Rhamnose
+0.1
+0.1
-0.2
-0.8
+0.1
no phage control
Control_ECOR27
+0.1
+0.1
+0.1
-0.7
-0.2
carbon source
L-Rhamnose
+0.0
-0.2
+0.0
-0.5
+0.1
phage
Bas09
+0.2
-0.1
+0.1
-0.6
-0.1
carbon source
L-Arabinose
-0.3
-0.2
+0.3
-0.2
+0.0
carbon source
D-Glucose
+0.2
-0.0
-0.1
-0.5
+0.1
phage
Bas67
-0.2
-0.1
+0.3
+0.1
-0.1
phage
Bas67
+0.0
+0.0
+0.2
+0.1
+0.0
phage
TP7
+0.3
+0.0
-0.0
+0.3
+0.0
carbon source
Sodium-DL-Lactate
+0.3
+0.1
+0.1
+0.4
+0.1
carbon source
Sodium-DL-Lactate
+0.4
-0.0
+0.0
+0.4
+0.3
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