Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 22 experiments (either direction), sorted by average fitness
Or view
all 22 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
rseB and rseC overlap by 4 nucleotides
rseC and lepA are separated by 197 nucleotides
lepA and lepB are separated by 15 nucleotides
lepB and rnc are separated by 272 nucleotides
NOLOHH_13060: rseB - sigma-E factor regulatory protein RseB, at 2,529,824 to 2,530,780
rseB
NOLOHH_13070: rseC - SoxR-reducing system protein RseC, at 2,530,777 to 2,531,256
rseC
NOLOHH_13075: lepA - translation elongation factor 4, at 2,531,454 to 2,533,253
lepA
NOLOHH_13080: lepB - signal peptidase I, at 2,533,269 to 2,534,243
lepB
NOLOHH_13085: rnc - ribonuclease III, at 2,534,516 to 2,535,196
rnc
Group
Condition
NOLOHH
_13060
NOLOHH
_13070
NOLOHH
_13075
NOLOHH
_13080
NOLOHH
_13085
rseB
rseC
lepA
lepB
rnc
carbon source
Casamino-acids
-0.3
-1.5
-4.0
N.D.
N.D.
carbon source
L-Rhamnose
-0.4
-0.7
-1.9
N.D.
N.D.
phage
Bas67
-0.2
-1.4
-1.4
N.D.
N.D.
phage
K5
+0.0
-2.0
-0.9
N.D.
N.D.
no phage control
Control_ECOR27
+0.1
-1.7
-1.2
N.D.
N.D.
phage
TP12
-0.7
-1.3
-0.9
N.D.
N.D.
phage
Bas09
-0.2
-1.4
-1.1
N.D.
N.D.
phage
Bas69
+0.3
-1.5
-1.3
N.D.
N.D.
carbon source
L-Rhamnose
+0.0
-1.1
-1.2
N.D.
N.D.
phage
K5
-0.0
-2.1
-0.2
N.D.
N.D.
carbon source
Casamino-acids
-0.2
-0.8
-1.0
N.D.
N.D.
phage
RB49
-0.1
-1.5
-0.4
N.D.
N.D.
phage
TP2
+0.5
-1.4
-1.2
N.D.
N.D.
phage
Bas67
-0.0
-0.9
-0.9
N.D.
N.D.
phage
TP12
+0.1
-1.1
-0.6
N.D.
N.D.
carbon source
Sodium-DL-Lactate
+0.0
-0.6
-1.0
N.D.
N.D.
carbon source
Sodium-DL-Lactate
-0.3
-0.3
-0.9
N.D.
N.D.
phage
TP7
-0.2
-0.6
-0.1
N.D.
N.D.
carbon source
L-Arabinose
+0.1
+0.6
-1.5
N.D.
N.D.
carbon source
D-Glucose
+0.5
-1.0
-0.1
N.D.
N.D.
carbon source
D-Glucose
+0.4
-0.4
-0.3
N.D.
N.D.
carbon source
L-Arabinose
+0.8
-0.3
-0.1
N.D.
N.D.
remove
NOLOHH_13060
plot
remove
NOLOHH_13070
plot
remove
NOLOHH_13075
remove
NOLOHH_13080
plot
remove
NOLOHH_13085
plot