Fitness for 5 genes in Escherichia coli ECOR27

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500 ntrimM and trmD are separated by 30 nucleotidestrmD and rplS are separated by 41 nucleotidesrplS and yfiB are separated by 76 nucleotidesyfiB and dgcN are separated by 15 nucleotides NOLOHH_12855: rimM - ribosome maturation factor RimM, at 2,492,657 to 2,493,205 rimM NOLOHH_12860: trmD - tRNA (guanosine(37)-N1)-methyltransferase TrmD, at 2,493,236 to 2,494,003 trmD NOLOHH_12865: rplS - 50S ribosomal protein L19, at 2,494,045 to 2,494,392 rplS NOLOHH_12870: yfiB - OmpA family protein, at 2,494,469 to 2,494,951 yfiB NOLOHH_12875: dgcN - diguanylate cyclase DgcN, at 2,494,967 to 2,496,193 dgcN
Group Condition NOLOHH_12855 NOLOHH_12860 NOLOHH_12865 NOLOHH_12870 NOLOHH_12875
rimM trmD rplS yfiB dgcN
carbon source L-Arabinose N.D. N.D. N.D. -0.4 +0.0
phage Bas67 N.D. N.D. N.D. -0.4 +0.1
phage RB49 N.D. N.D. N.D. -0.3 +0.1
phage Bas67 N.D. N.D. N.D. -0.0 -0.2
phage TP12 N.D. N.D. N.D. -0.1 +0.0
carbon source Casamino-acids N.D. N.D. N.D. -0.4 +0.3
phage K5 N.D. N.D. N.D. +0.1 -0.2
carbon source Sodium-DL-Lactate N.D. N.D. N.D. -0.4 +0.3
carbon source Sodium-DL-Lactate N.D. N.D. N.D. -0.2 +0.3
phage TP7 N.D. N.D. N.D. -0.3 +0.4
carbon source L-Rhamnose N.D. N.D. N.D. +0.5 -0.2
phage K5 N.D. N.D. N.D. +0.3 -0.0
carbon source L-Arabinose N.D. N.D. N.D. +0.0 +0.3
phage Bas09 N.D. N.D. N.D. +0.2 +0.2
carbon source L-Rhamnose N.D. N.D. N.D. -0.1 +0.5
carbon source D-Glucose N.D. N.D. N.D. -0.1 +0.5
no phage control Control_ECOR27 N.D. N.D. N.D. -0.4 +0.9
carbon source D-Glucose N.D. N.D. N.D. -0.2 +0.7
phage TP12 N.D. N.D. N.D. +0.5 +0.1
phage Bas69 N.D. N.D. N.D. -0.0 +0.6
phage TP2 N.D. N.D. N.D. +0.1 +1.1
carbon source Casamino-acids N.D. N.D. N.D. +0.7 +0.8
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