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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
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500 nt
NOLOHH_12775 and NOLOHH_12780 are separated by 73 nucleotides
NOLOHH_12780 and NOLOHH_12785 are separated by 38 nucleotides
NOLOHH_12785 and smpB are separated by 742 nucleotides
smpB and ratA are separated by 131 nucleotides
NOLOHH_12775: NOLOHH_12775 - Response-reg-2 domain-containing protein, at 2,478,355 to 2,480,103
_12775
NOLOHH_12780: NOLOHH_12780 - hypothetical protein, at 2,480,177 to 2,480,593
_12780
NOLOHH_12785: NOLOHH_12785 - integrase, at 2,480,632 to 2,481,861
_12785
NOLOHH_12795: smpB - SsrA-binding protein SmpB, at 2,482,604 to 2,483,086
smpB
NOLOHH_12800: ratA - type II toxin-antitoxin system toxin RatA, at 2,483,218 to 2,483,694
ratA
Group
Condition
NOLOHH
_12775
NOLOHH
_12780
NOLOHH
_12785
NOLOHH
_12795
NOLOHH
_12800
smpB
ratA
phage
K5
-1.2
N.D.
-0.0
N.D.
N.D.
phage
RB49
-0.5
N.D.
-0.6
N.D.
N.D.
carbon source
L-Arabinose
-0.8
N.D.
-0.2
N.D.
N.D.
no phage control
Control_ECOR27
-0.7
N.D.
-0.2
N.D.
N.D.
carbon source
L-Arabinose
-0.7
N.D.
-0.0
N.D.
N.D.
phage
TP12
-0.6
N.D.
-0.1
N.D.
N.D.
phage
TP7
-0.4
N.D.
-0.2
N.D.
N.D.
phage
K5
-0.4
N.D.
-0.2
N.D.
N.D.
carbon source
L-Rhamnose
-0.6
N.D.
+0.1
N.D.
N.D.
phage
TP2
-0.3
N.D.
-0.3
N.D.
N.D.
phage
TP12
-0.2
N.D.
-0.1
N.D.
N.D.
carbon source
D-Glucose
-0.4
N.D.
+0.2
N.D.
N.D.
carbon source
D-Glucose
-0.1
N.D.
-0.1
N.D.
N.D.
phage
Bas67
-0.1
N.D.
-0.1
N.D.
N.D.
carbon source
L-Rhamnose
-0.1
N.D.
+0.0
N.D.
N.D.
phage
Bas67
+0.1
N.D.
-0.1
N.D.
N.D.
carbon source
Casamino-acids
+0.2
N.D.
-0.1
N.D.
N.D.
carbon source
Sodium-DL-Lactate
+0.0
N.D.
+0.2
N.D.
N.D.
carbon source
Casamino-acids
+0.3
N.D.
-0.1
N.D.
N.D.
phage
Bas69
+0.5
N.D.
+0.0
N.D.
N.D.
carbon source
Sodium-DL-Lactate
+0.5
N.D.
+0.1
N.D.
N.D.
phage
Bas09
+0.8
N.D.
-0.2
N.D.
N.D.
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