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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
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500 nt
nrdI and nrdH overlap by 4 nucleotides
nrdH and ygaM are separated by 247 nucleotides
ygaM and ygaC are separated by 151 nucleotides
ygaC and alaE are separated by 36 nucleotides
NOLOHH_12675: nrdI - class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI, at 2,461,423 to 2,461,833
nrdI
NOLOHH_12680: nrdH - glutaredoxin-like protein NrdH, at 2,461,830 to 2,462,075
nrdH
NOLOHH_12685: ygaM - Uncharacterized protein YgaM, at 2,462,323 to 2,462,652
ygaM
NOLOHH_12690: ygaC - DUF2002 domain-containing protein, at 2,462,804 to 2,463,148
ygaC
NOLOHH_12695: alaE - L-alanine exporter AlaE, at 2,463,185 to 2,463,634
alaE
Group
Condition
NOLOHH
_12675
NOLOHH
_12680
NOLOHH
_12685
NOLOHH
_12690
NOLOHH
_12695
nrdI
nrdH
ygaM
ygaC
alaE
carbon source
D-Glucose
-0.0
-1.2
-0.3
-0.1
-0.1
phage
Bas69
-0.4
-1.0
-0.8
+0.8
-0.0
carbon source
Casamino-acids
-0.4
-0.6
-0.0
-0.3
-0.1
carbon source
L-Rhamnose
-0.1
-1.1
-0.1
+0.1
-0.1
phage
Bas67
-0.0
-0.3
-0.8
+0.1
+0.0
carbon source
L-Arabinose
+0.0
-0.4
+0.1
+0.2
-0.6
phage
TP12
-0.3
-0.4
-0.3
+0.4
-0.0
phage
TP12
+0.1
+0.0
-0.8
+0.4
-0.2
carbon source
Sodium-DL-Lactate
-0.0
-0.5
-0.0
-0.0
-0.1
phage
TP7
+0.2
-0.2
-0.5
-0.3
+0.2
no phage control
Control_ECOR27
+0.0
-0.2
-0.8
+0.4
+0.0
carbon source
L-Arabinose
+0.0
+0.2
-0.1
+0.4
-1.0
phage
Bas67
-0.0
-0.4
-0.1
+0.0
+0.2
carbon source
Sodium-DL-Lactate
-0.2
-0.0
-0.1
-0.1
+0.2
carbon source
L-Rhamnose
-0.2
-0.1
+0.7
-0.1
-0.3
carbon source
D-Glucose
-0.4
+0.1
+0.0
+0.2
+0.2
phage
RB49
+0.1
+0.1
-0.2
-0.1
+0.1
phage
K5
+0.0
-0.5
+0.1
+0.2
+0.3
phage
K5
+0.1
+0.3
-0.3
-0.1
+0.2
carbon source
Casamino-acids
-0.1
-0.1
+0.5
+0.1
-0.1
phage
Bas09
+0.4
-0.0
-0.1
+0.4
-0.3
phage
TP2
-0.5
+0.5
+0.3
+0.2
+0.2
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