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Gene
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Cofit
Fitness for 5 genes in
Escherichia coli ECOR27
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500 nt
Arg_trna and Arg_trna are separated by 63 nucleotides
Arg_trna and Arg_trna are separated by 198 nucleotides
Arg_trna and yqaB are separated by 280 nucleotides
yqaB and ygaA overlap by 4 nucleotides
NOLOHH_12575: Arg_trna - tRNA-Arg(acg), at 2,444,515 to 2,444,591
_trna
NOLOHH_12580: Arg_trna - tRNA-Arg(acg), at 2,444,655 to 2,444,731
_trna
NOLOHH_12585: Arg_trna - tRNA-Arg(acg), at 2,444,930 to 2,445,006
_trna
NOLOHH_12590: yqaB - fructose-1-phosphate/6-phosphogluconate phosphatase, at 2,445,287 to 2,445,853
yqaB
NOLOHH_12595: ygaA - SNARE associated Golgi protein, at 2,445,850 to 2,446,278
ygaA
Group
Condition
NOLOHH
_12575
NOLOHH
_12580
NOLOHH
_12585
NOLOHH
_12590
NOLOHH
_12595
Arg_trna
Arg_trna
Arg_trna
yqaB
ygaA
phage
TP12
N.D.
N.D.
N.D.
-1.1
-0.4
phage
TP7
N.D.
N.D.
N.D.
-1.0
-0.0
phage
Bas69
N.D.
N.D.
N.D.
-0.1
-0.9
phage
Bas67
N.D.
N.D.
N.D.
-0.7
-0.0
carbon source
Sodium-DL-Lactate
N.D.
N.D.
N.D.
-0.4
-0.2
phage
Bas67
N.D.
N.D.
N.D.
-0.5
-0.0
phage
RB49
N.D.
N.D.
N.D.
-0.8
+0.4
carbon source
L-Rhamnose
N.D.
N.D.
N.D.
-0.4
-0.0
phage
Bas09
N.D.
N.D.
N.D.
-0.4
-0.0
phage
K5
N.D.
N.D.
N.D.
-0.5
+0.1
carbon source
D-Glucose
N.D.
N.D.
N.D.
-0.1
-0.2
no phage control
Control_ECOR27
N.D.
N.D.
N.D.
-0.1
-0.0
carbon source
D-Glucose
N.D.
N.D.
N.D.
-0.2
+0.3
carbon source
Casamino-acids
N.D.
N.D.
N.D.
+0.1
+0.0
phage
TP12
N.D.
N.D.
N.D.
-0.0
+0.1
carbon source
L-Arabinose
N.D.
N.D.
N.D.
+0.3
-0.2
carbon source
L-Arabinose
N.D.
N.D.
N.D.
+0.5
-0.2
phage
TP2
N.D.
N.D.
N.D.
+0.6
-0.3
carbon source
Sodium-DL-Lactate
N.D.
N.D.
N.D.
+0.4
+0.2
phage
K5
N.D.
N.D.
N.D.
+0.5
+0.2
carbon source
L-Rhamnose
N.D.
N.D.
N.D.
+0.5
+0.2
carbon source
Casamino-acids
N.D.
N.D.
N.D.
+1.0
+0.2
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