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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
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Top 22 experiments (either direction), sorted by average fitness
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500 nt
hypB and hypA are separated by 3 nucleotides
hypA and hycA are separated by 211 nucleotides
hycA and hycB are separated by 124 nucleotides
hycB and hycC overlap by 4 nucleotides
NOLOHH_12405: hypB - hydrogenase nickel incorporation protein HypB, at 2,410,743 to 2,411,615
hypB
NOLOHH_12410: hypA - hydrogenase maturation nickel metallochaperone HypA, at 2,411,619 to 2,411,969
hypA
NOLOHH_12415: hycA - formate hydrogenlyase regulator HycA, at 2,412,181 to 2,412,642
hycA
NOLOHH_12420: hycB - formate hydrogenlyase subunit HycB, at 2,412,767 to 2,413,378
hycB
NOLOHH_12425: hycC - formate hydrogenlyase subunit 3, at 2,413,375 to 2,415,201
hycC
Group
Condition
NOLOHH
_12405
NOLOHH
_12410
NOLOHH
_12415
NOLOHH
_12420
NOLOHH
_12425
hypB
hypA
hycA
hycB
hycC
phage
TP12
-0.5
-0.1
+0.0
-0.4
+0.2
phage
TP12
-0.5
-0.5
-0.1
+0.4
+0.0
carbon source
L-Arabinose
+0.8
-0.3
+0.0
-0.6
-0.5
phage
Bas69
-0.1
+0.2
+0.1
-0.8
+0.2
carbon source
L-Rhamnose
-0.0
-0.1
-0.0
-0.2
+0.0
no phage control
Control_ECOR27
+0.3
-0.6
-0.1
-0.1
+0.1
carbon source
Casamino-acids
-0.4
-0.0
+0.1
+0.1
-0.1
phage
Bas67
-0.3
-0.0
-0.1
-0.1
+0.2
phage
Bas09
-0.2
+0.1
-0.0
+0.0
-0.0
carbon source
D-Glucose
+0.0
-0.1
+0.1
+0.2
-0.2
phage
K5
-0.5
+0.1
+0.1
-0.1
+0.4
carbon source
Sodium-DL-Lactate
-0.3
-0.2
-0.1
+0.6
+0.1
phage
K5
-0.4
+0.2
+0.0
+0.1
+0.2
carbon source
L-Rhamnose
+0.4
+0.0
+0.1
-0.2
-0.2
carbon source
D-Glucose
-0.2
-0.2
+0.1
+0.7
-0.1
phage
TP2
-0.5
+1.0
-0.1
-0.2
+0.2
phage
TP7
-0.4
+0.3
+0.1
-0.0
+0.3
phage
Bas67
+0.1
+0.3
-0.1
+0.0
+0.2
carbon source
Sodium-DL-Lactate
-0.1
+0.4
-0.1
+0.2
+0.0
phage
RB49
-0.4
+0.2
+0.2
+0.5
-0.0
carbon source
Casamino-acids
+0.3
+0.0
-0.1
+0.4
+0.1
carbon source
L-Arabinose
-0.3
+0.6
-0.1
+0.7
-0.1
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