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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
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500 nt
sdaC and ppnN are separated by 556 nucleotides
ppnN and queF are separated by 111 nucleotides
queF and syd are separated by 67 nucleotides
syd and yqcC are separated by 621 nucleotides
NOLOHH_12060: sdaC - HAAAP family serine/threonine permease SdaC, at 2,337,627 to 2,338,916
sdaC
NOLOHH_12065: ppnN - nucleotide 5'-monophosphate nucleosidase, at 2,339,473 to 2,340,837
ppnN
NOLOHH_12070: queF - NADPH-dependent 7-cyano-7-deazaguanine reductase QueF, at 2,340,949 to 2,341,797
queF
NOLOHH_12075: syd - SecY-interacting protein, at 2,341,865 to 2,342,410
syd
NOLOHH_12085: yqcC - Uncharacterized protein YqcC, at 2,343,032 to 2,343,361
yqcC
Group
Condition
NOLOHH
_12060
NOLOHH
_12065
NOLOHH
_12070
NOLOHH
_12075
NOLOHH
_12085
sdaC
ppnN
queF
syd
yqcC
phage
K5
-0.9
+0.1
-0.1
-0.0
-0.5
phage
TP2
+0.5
-0.1
-0.1
-0.1
-1.0
carbon source
L-Arabinose
-0.4
-0.0
-0.3
-0.1
+0.2
carbon source
L-Rhamnose
+0.5
-1.1
-0.3
-0.2
+0.4
phage
TP12
-0.3
-0.3
-0.0
-0.1
+0.3
carbon source
D-Glucose
-0.1
+0.2
-0.1
-0.4
+0.1
phage
K5
-0.0
-0.1
+0.2
-0.1
-0.2
carbon source
Casamino-acids
+0.0
-0.1
-0.1
-0.0
-0.0
carbon source
L-Rhamnose
+0.9
-1.0
-0.0
+0.3
-0.4
carbon source
L-Arabinose
+0.4
-0.0
+0.0
+0.1
-0.6
phage
TP7
+0.6
+0.0
+0.0
-0.3
-0.4
carbon source
D-Glucose
+0.0
+0.1
+0.2
-0.0
-0.3
phage
Bas67
+0.6
-0.2
+0.1
-0.3
-0.2
phage
RB49
+0.1
+0.0
+0.1
-0.1
-0.1
carbon source
Sodium-DL-Lactate
-0.1
+0.0
+0.1
-0.0
+0.1
carbon source
Casamino-acids
+0.2
-0.0
-0.4
+0.2
+0.1
phage
Bas09
+0.4
-0.0
+0.2
-0.3
-0.0
phage
Bas69
-0.0
+0.1
+0.1
+0.3
-0.0
carbon source
Sodium-DL-Lactate
+0.3
-0.2
+0.1
+0.2
+0.2
phage
Bas67
+0.2
+0.0
+0.1
+0.2
+0.0
no phage control
Control_ECOR27
+0.4
+0.1
-0.0
-0.1
+0.2
phage
TP12
+0.3
+0.1
+0.1
-0.1
+0.2
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