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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
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Top 22 experiments (either direction), sorted by average fitness
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500 nt
dpaL and ygeW are separated by 57 nucleotides
ygeW and uacR are separated by 478 nucleotides
uacR and xdhB are separated by 39 nucleotides
xdhB and xdhB overlap by 4 nucleotides
NOLOHH_11615: dpaL - diaminopropionate ammonia-lyase, at 2,251,658 to 2,252,854
dpaL
NOLOHH_11620: ygeW - knotted carbamoyltransferase YgeW, at 2,252,912 to 2,254,099
ygeW
NOLOHH_11625: uacR - Putative uric acid sigma-54-dependent transcriptional regulator UacR, at 2,254,578 to 2,256,356
uacR
NOLOHH_11630: xdhB - xanthine dehydrogenase FAD-binding subunit XdhB, at 2,256,396 to 2,256,875
xdhB
NOLOHH_11635: xdhB - xanthine dehydrogenase FAD-binding subunit XdhB, at 2,256,872 to 2,257,750
xdhB
Group
Condition
NOLOHH
_11615
NOLOHH
_11620
NOLOHH
_11625
NOLOHH
_11630
NOLOHH
_11635
dpaL
ygeW
uacR
xdhB
xdhB
phage
Bas67
-0.1
-0.0
-0.1
-0.0
+0.1
phage
K5
+0.1
-0.0
+0.0
-0.1
-0.1
carbon source
L-Rhamnose
-0.2
+0.1
+0.1
-0.1
-0.1
phage
Bas09
-0.0
-0.0
+0.2
-0.2
-0.0
carbon source
L-Rhamnose
+0.0
-0.0
+0.1
-0.2
+0.0
carbon source
D-Glucose
-0.1
+0.1
-0.0
+0.1
-0.0
phage
Bas69
-0.1
-0.1
+0.0
+0.4
-0.2
carbon source
Sodium-DL-Lactate
+0.2
-0.1
+0.0
-0.1
-0.0
phage
TP7
+0.1
+0.1
-0.1
-0.2
+0.2
phage
RB49
-0.0
-0.1
+0.0
+0.1
+0.0
carbon source
Casamino-acids
+0.0
-0.0
-0.2
+0.1
+0.2
carbon source
D-Glucose
+0.2
-0.1
-0.0
+0.1
-0.1
no phage control
Control_ECOR27
+0.0
-0.1
+0.0
+0.2
-0.0
phage
Bas67
-0.1
-0.0
+0.1
-0.1
+0.2
phage
K5
+0.0
-0.1
+0.1
+0.1
-0.0
carbon source
L-Arabinose
+0.0
+0.1
-0.0
+0.1
-0.0
carbon source
Casamino-acids
+0.1
+0.0
+0.1
-0.1
+0.1
phage
TP2
+0.1
+0.0
+0.2
+0.1
-0.0
carbon source
Sodium-DL-Lactate
+0.1
-0.0
+0.1
-0.0
+0.2
phage
TP12
+0.0
+0.0
+0.0
+0.1
+0.2
phage
TP12
+0.2
+0.1
+0.1
+0.2
-0.1
carbon source
L-Arabinose
-0.1
+0.3
+0.2
+0.1
+0.1
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