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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
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500 nt
zapA and ygfB are separated by 167 nucleotides
ygfB and pepP are separated by 25 nucleotides
pepP and ubiH overlap by 4 nucleotides
ubiH and ubiI are separated by 22 nucleotides
NOLOHH_11405: zapA - cell division protein ZapA, at 2,204,605 to 2,204,934
zapA
NOLOHH_11410: ygfB - UPF0149 family protein YgfB, at 2,205,102 to 2,205,680
ygfB
NOLOHH_11415: pepP - Xaa-Pro aminopeptidase, at 2,205,706 to 2,207,031
pepP
NOLOHH_11420: ubiH - 2-octaprenyl-6-methoxyphenyl hydroxylase, at 2,207,028 to 2,208,206
ubiH
NOLOHH_11425: ubiI - FAD-dependent 2-octaprenylphenol hydroxylase, at 2,208,229 to 2,209,431
ubiI
Group
Condition
NOLOHH
_11405
NOLOHH
_11410
NOLOHH
_11415
NOLOHH
_11420
NOLOHH
_11425
zapA
ygfB
pepP
ubiH
ubiI
phage
Bas31
-1.1
-1.5
-2.1
N.D.
-3.2
phage
Bas31
-1.1
-1.2
-1.3
N.D.
-3.3
phage
Bas69
-1.5
-0.8
-2.6
N.D.
-1.1
carbon source
L-Arabinose
-0.4
-0.4
-0.0
N.D.
-4.5
phage
TP2
-0.6
-0.9
-2.2
N.D.
-1.3
phage
P1vir
+0.2
-0.2
-0.9
N.D.
-3.7
carbon source
L-Rhamnose
+0.4
-0.5
-0.8
N.D.
-2.9
carbon source
L-Rhamnose
+0.7
-0.7
-0.7
N.D.
-2.9
no phage control
Control_ECOR27
+0.2
-0.5
-0.6
N.D.
-2.6
phage
Bas05
-0.3
-0.5
-1.2
N.D.
-1.4
phage
Bas07
-0.1
-0.4
-0.5
N.D.
-2.4
phage
Bas68
+0.0
-0.6
-0.9
N.D.
-2.0
phage
TP12
-0.2
-0.6
-1.2
N.D.
-1.3
phage
Bas68
-0.0
-0.6
-0.9
N.D.
-1.7
phage
CEV1
+0.0
-0.7
-1.0
N.D.
-1.5
no phage control
Control_ECOR27
+0.1
-0.4
-0.7
N.D.
-2.0
phage
RB68
+0.1
-0.4
-0.9
N.D.
-1.9
phage
Bas37
+0.0
-0.5
-0.4
N.D.
-2.2
phage
Bas45
-0.0
-0.2
-0.8
N.D.
-2.0
phage
Bas10
-0.1
-0.6
-0.9
N.D.
-1.4
phage
JK16
-0.2
-0.2
-1.1
N.D.
-1.4
phage
Bas21
+0.1
-0.5
-1.1
N.D.
-1.2
phage
K25
+0.2
-0.2
-0.5
N.D.
-2.2
phage
TP12
-0.5
-0.2
-1.3
N.D.
-0.7
phage
K25
+0.1
-0.3
-0.9
N.D.
-1.5
carbon source
D-Glucose
+0.1
-0.4
+0.2
N.D.
-2.4
carbon source
Casamino-acids
-0.1
+0.0
-1.0
N.D.
-1.5
phage
RB68
+0.2
-0.3
-0.6
N.D.
-1.8
no phage control
Control_ECOR27
+0.1
-0.2
-0.6
N.D.
-1.6
phage
Bas38
+0.1
-0.2
-0.3
N.D.
-1.8
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