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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
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Top 22 experiments (either direction), sorted by average fitness
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500 nt
speA and NOLOHH_11180 are separated by 145 nucleotides
NOLOHH_11180 and speB are separated by 135 nucleotides
speB and dagR are separated by 216 nucleotides
dagR and NOLOHH_11195 are separated by 118 nucleotides
NOLOHH_11175: speA - biosynthetic arginine decarboxylase, at 2,162,799 to 2,164,775
speA
NOLOHH_11180: NOLOHH_11180 - Lipoprotein, at 2,164,921 to 2,165,652
_11180
NOLOHH_11185: speB - agmatinase, at 2,165,788 to 2,166,708
speB
NOLOHH_11190: dagR - transcriptional regulator DagR, at 2,166,925 to 2,169,765
dagR
NOLOHH_11195: NOLOHH_11195 - PTS fructose transporter subunit IIA, at 2,169,884 to 2,170,312
_11195
Group
Condition
NOLOHH
_11175
NOLOHH
_11180
NOLOHH
_11185
NOLOHH
_11190
NOLOHH
_11195
speA
speB
dagR
phage
TP2
-2.3
-0.4
-2.4
+0.1
-1.0
phage
Bas69
-2.4
-0.3
-1.9
-0.0
-0.6
phage
RB49
-0.4
-0.4
-1.0
-0.0
-1.2
carbon source
Casamino-acids
-1.4
-0.1
-1.6
-0.1
+0.5
carbon source
Casamino-acids
-1.3
-0.1
-1.4
-0.1
+1.0
phage
K5
-0.6
+0.0
+0.2
+0.0
-0.9
carbon source
D-Glucose
-0.2
-0.1
-1.1
-0.1
+0.2
carbon source
L-Rhamnose
-0.3
-0.0
-0.6
+0.1
-0.2
phage
Bas67
-0.4
-0.1
-0.2
-0.1
-0.2
carbon source
D-Glucose
-0.2
-0.0
-0.4
+0.1
-0.5
carbon source
L-Rhamnose
-0.3
+0.2
-0.3
-0.0
-0.4
phage
K5
-0.6
-0.2
-0.1
-0.1
+0.1
phage
TP12
-0.5
+0.1
-0.3
-0.0
+0.2
no phage control
Control_ECOR27
-0.4
+0.0
-0.0
+0.1
-0.1
phage
TP12
-0.6
-0.2
+0.0
-0.0
+0.6
phage
Bas09
-0.4
-0.2
+0.2
+0.1
+0.1
phage
TP7
-0.4
-0.1
+0.3
-0.0
-0.0
carbon source
L-Arabinose
-0.1
+0.0
-0.3
+0.1
-0.0
phage
Bas67
-0.3
-0.1
+0.2
+0.1
-0.1
carbon source
Sodium-DL-Lactate
-0.1
+0.1
-0.1
+0.0
-0.1
carbon source
Sodium-DL-Lactate
-0.0
-0.0
-0.1
-0.0
+0.1
carbon source
L-Arabinose
-0.2
-0.0
-0.0
+0.0
+0.4
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