Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 22 experiments (either direction), sorted by average fitness
Or view
all 22 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
hemW and rdgB overlap by 8 nucleotides
rdgB and yggU are separated by 7 nucleotides
yggU and yggT overlap by 4 nucleotides
yggT and yggS are separated by 17 nucleotides
NOLOHH_11105: hemW - radical SAM family heme chaperone HemW, at 2,150,303 to 2,151,439
hemW
NOLOHH_11110: rdgB - XTP/dITP diphosphatase, at 2,151,432 to 2,152,025
rdgB
NOLOHH_11115: yggU - DUF167 domain-containing protein, at 2,152,033 to 2,152,323
yggU
NOLOHH_11120: yggT - osmotic shock tolerance protein YggT, at 2,152,320 to 2,152,886
yggT
NOLOHH_11125: yggS - pyridoxal phosphate homeostasis protein, at 2,152,904 to 2,153,608
yggS
Group
Condition
NOLOHH
_11105
NOLOHH
_11110
NOLOHH
_11115
NOLOHH
_11120
NOLOHH
_11125
hemW
rdgB
yggU
yggT
yggS
carbon source
Casamino-acids
-0.2
-0.3
-0.3
-5.7
+0.1
carbon source
L-Arabinose
-0.3
-0.5
-0.2
-1.2
-0.8
carbon source
Casamino-acids
-0.4
-0.3
-0.2
-1.5
-0.3
carbon source
L-Rhamnose
-0.6
+0.6
+0.3
-0.8
-1.9
carbon source
L-Rhamnose
-0.4
-0.6
-0.4
+0.5
-1.1
carbon source
Sodium-DL-Lactate
-0.3
-0.2
-0.5
-1.1
+0.1
phage
TP12
-0.6
-0.5
-0.4
+0.6
-0.5
carbon source
L-Arabinose
-0.1
-0.1
-0.1
-0.2
-0.8
phage
Bas67
+0.2
-0.5
-0.1
-0.5
-0.2
phage
Bas69
-0.2
-1.1
+0.5
+1.6
-1.9
phage
Bas09
-0.1
-0.2
+0.4
-0.4
-0.3
no phage control
Control_ECOR27
+0.2
-0.0
+0.7
-0.7
-0.7
phage
Bas67
-0.3
-0.4
+0.4
+0.4
-0.4
carbon source
Sodium-DL-Lactate
-0.4
-0.2
+0.2
+0.3
+0.1
carbon source
D-Glucose
-0.1
-0.1
+0.1
+0.3
-0.0
phage
RB49
-0.0
-0.1
+0.4
+0.2
-0.0
phage
TP2
-0.6
-0.3
-0.1
+2.7
-1.2
phage
TP12
-0.3
-0.2
+0.6
+0.8
-0.4
phage
K5
-0.0
-0.0
+0.3
+0.6
-0.2
phage
K5
+0.0
-0.1
+0.1
+1.0
-0.3
carbon source
D-Glucose
-0.2
+0.5
+0.5
-0.4
+0.3
phage
TP7
+0.1
+0.2
+0.4
+0.5
-0.2
remove
NOLOHH_11105
plot
remove
NOLOHH_11110
plot
remove
NOLOHH_11115
remove
NOLOHH_11120
plot
remove
NOLOHH_11125
plot