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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
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500 nt
rpsU and tsaD are separated by 237 nucleotides
tsaD and ttdT are separated by 42 nucleotides
ttdT and ttdB are separated by 47 nucleotides
ttdB and ttdA overlap by 4 nucleotides
NOLOHH_10455: rpsU - 30S ribosomal protein S21, at 2,021,820 to 2,022,035
rpsU
NOLOHH_10460: tsaD - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD, at 2,022,273 to 2,023,286
tsaD
NOLOHH_10465: ttdT - L-tartrate/succinate antiporter, at 2,023,329 to 2,024,792
ttdT
NOLOHH_10470: ttdB - L(+)-tartrate dehydratase subunit beta, at 2,024,840 to 2,025,445
ttdB
NOLOHH_10475: ttdA - L(+)-tartrate dehydratase subunit alpha, at 2,025,442 to 2,026,353
ttdA
Group
Condition
NOLOHH
_10455
NOLOHH
_10460
NOLOHH
_10465
NOLOHH
_10470
NOLOHH
_10475
rpsU
tsaD
ttdT
ttdB
ttdA
carbon source
Casamino-acids
N.D.
N.D.
-0.0
-0.2
-0.2
carbon source
L-Arabinose
N.D.
N.D.
+0.1
-0.3
-0.1
carbon source
L-Rhamnose
N.D.
N.D.
-0.2
-0.1
+0.2
carbon source
D-Glucose
N.D.
N.D.
-0.0
-0.1
-0.0
carbon source
D-Glucose
N.D.
N.D.
-0.1
+0.3
-0.3
carbon source
Casamino-acids
N.D.
N.D.
+0.1
-0.2
+0.1
carbon source
Sodium-DL-Lactate
N.D.
N.D.
-0.1
+0.1
-0.0
carbon source
L-Rhamnose
N.D.
N.D.
-0.1
+0.0
+0.1
carbon source
Sodium-DL-Lactate
N.D.
N.D.
-0.0
+0.1
-0.0
phage
Bas09
N.D.
N.D.
+0.1
+0.3
-0.2
phage
K5
N.D.
N.D.
+0.0
+0.5
-0.2
phage
TP12
N.D.
N.D.
-0.1
+0.5
-0.0
phage
Bas67
N.D.
N.D.
+0.1
+0.5
-0.1
carbon source
L-Arabinose
N.D.
N.D.
+0.0
+0.5
+0.1
phage
K5
N.D.
N.D.
+0.0
+0.5
+0.0
phage
Bas67
N.D.
N.D.
+0.0
+0.6
+0.0
no phage control
Control_ECOR27
N.D.
N.D.
+0.0
+0.6
+0.0
phage
TP7
N.D.
N.D.
+0.1
+0.6
-0.0
phage
Bas69
N.D.
N.D.
-0.2
+1.1
-0.1
phage
TP12
N.D.
N.D.
-0.0
+1.0
-0.1
phage
TP2
N.D.
N.D.
-0.1
+1.1
+0.1
phage
RB49
N.D.
N.D.
+0.1
+1.1
+0.2
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