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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
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Top 22 experiments (either direction), sorted by average fitness
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500 nt
dolP and diaA are separated by 9 nucleotides
diaA and yraN are separated by 19 nucleotides
yraN and lpoA overlap by 43 nucleotides
lpoA and rsmI are separated by 63 nucleotides
NOLOHH_10015: dolP - division/outer membrane stress-associated lipid-binding lipoprotein, at 1,928,526 to 1,929,101
dolP
NOLOHH_10020: diaA - DnaA initiator-associating protein DiaA, at 1,929,111 to 1,929,701
diaA
NOLOHH_10025: yraN - YraN family protein, at 1,929,721 to 1,930,116
yraN
NOLOHH_10030: lpoA - penicillin-binding protein activator LpoA, at 1,930,074 to 1,932,110
lpoA
NOLOHH_10035: rsmI - 16S rRNA (cytidine(1402)-2'-O)-methyltransferase, at 1,932,174 to 1,933,034
rsmI
Group
Condition
NOLOHH
_10015
NOLOHH
_10020
NOLOHH
_10025
NOLOHH
_10030
NOLOHH
_10035
dolP
diaA
yraN
lpoA
rsmI
carbon source
Casamino-acids
-0.1
+0.2
-0.8
-0.1
-0.4
phage
TP2
-0.1
-1.0
+0.6
-0.6
-0.1
phage
Bas67
+0.0
-0.5
-0.5
+0.0
-0.3
phage
TP12
-0.2
-0.2
+0.0
+0.0
-0.5
phage
Bas67
+0.1
-0.6
+0.1
+0.0
-0.4
no phage control
Control_ECOR27
+0.1
-0.7
-0.4
+0.2
+0.2
carbon source
D-Glucose
-0.3
+0.0
-0.0
-0.1
-0.1
phage
K5
-0.1
-0.2
-0.1
-0.4
+0.3
phage
K5
+0.1
-0.2
+0.0
-0.4
+0.1
phage
RB49
+0.0
-0.3
-0.1
+0.1
-0.0
phage
TP7
+0.1
-0.3
-0.1
+0.1
-0.1
phage
TP12
-0.1
-0.2
+0.0
+0.0
+0.0
phage
Bas69
-0.0
-0.4
+0.2
-0.3
+0.5
carbon source
L-Arabinose
-0.1
+0.6
-0.3
-0.1
-0.0
carbon source
Sodium-DL-Lactate
-0.0
+0.5
+0.1
+0.1
-0.6
phage
Bas09
-0.1
-0.5
+0.5
+0.0
+0.3
carbon source
L-Arabinose
-0.1
+0.5
-0.1
-0.2
+0.2
carbon source
Sodium-DL-Lactate
+0.1
+0.8
-0.2
+0.1
-0.3
carbon source
Casamino-acids
-0.1
+0.4
+0.3
-0.1
+0.2
carbon source
D-Glucose
-0.0
+0.4
+0.4
+0.0
+0.2
carbon source
L-Rhamnose
-0.1
+1.7
+0.0
-0.1
-0.5
carbon source
L-Rhamnose
+0.4
+1.5
-0.0
-0.3
-0.0
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