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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
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Top 22 experiments (either direction), sorted by average fitness
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500 nt
yhbO and yraR are separated by 127 nucleotides
yraR and yraQ are separated by 72 nucleotides
yraQ and dolP are separated by 113 nucleotides
dolP and diaA are separated by 9 nucleotides
NOLOHH_10000: yhbO - protein/nucleic acid deglycase, at 1,926,018 to 1,926,536
yhbO
NOLOHH_10005: yraR - Putative NAD(P)-binding protein YraR, at 1,926,664 to 1,927,299
yraR
NOLOHH_10010: yraQ - UPF0718 protein YraQ, at 1,927,372 to 1,928,412
yraQ
NOLOHH_10015: dolP - division/outer membrane stress-associated lipid-binding lipoprotein, at 1,928,526 to 1,929,101
dolP
NOLOHH_10020: diaA - DnaA initiator-associating protein DiaA, at 1,929,111 to 1,929,701
diaA
Group
Condition
NOLOHH
_10000
NOLOHH
_10005
NOLOHH
_10010
NOLOHH
_10015
NOLOHH
_10020
yhbO
yraR
yraQ
dolP
diaA
phage
Bas69
-1.1
-0.1
-0.2
-0.0
-0.4
phage
Bas67
-0.5
-0.2
-0.1
+0.0
-0.5
phage
Bas09
-0.5
-0.0
-0.1
-0.1
-0.5
phage
TP2
-0.2
+0.1
-0.0
-0.1
-1.0
phage
TP12
-0.8
+0.0
+0.1
-0.2
-0.2
phage
RB49
-0.8
-0.1
+0.1
+0.0
-0.3
no phage control
Control_ECOR27
-0.1
-0.1
-0.1
+0.1
-0.7
phage
TP12
-0.2
-0.2
-0.3
-0.1
-0.2
phage
TP7
-0.1
-0.1
-0.1
+0.1
-0.3
phage
Bas67
+0.1
-0.1
+0.0
+0.1
-0.6
carbon source
D-Glucose
-0.2
+0.2
-0.1
-0.3
+0.0
phage
K5
+0.2
-0.1
-0.0
-0.1
-0.2
carbon source
Casamino-acids
-0.5
+0.2
+0.1
-0.1
+0.2
carbon source
L-Arabinose
-0.5
+0.3
-0.3
-0.1
+0.5
carbon source
D-Glucose
-0.2
-0.2
+0.1
-0.0
+0.4
carbon source
Sodium-DL-Lactate
-0.3
+0.1
-0.1
-0.0
+0.5
phage
K5
+0.2
+0.1
-0.1
+0.1
-0.2
carbon source
Casamino-acids
-0.2
+0.0
+0.1
-0.1
+0.4
carbon source
L-Arabinose
+0.2
+0.1
-0.1
-0.1
+0.6
carbon source
Sodium-DL-Lactate
-0.1
+0.2
+0.1
+0.1
+0.8
carbon source
L-Rhamnose
-0.0
-0.3
-0.1
-0.1
+1.7
carbon source
L-Rhamnose
-0.0
-0.3
-0.1
+0.4
+1.5
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