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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
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500 nt
yhgN and asd are separated by 192 nucleotides
asd and yhgO are separated by 73 nucleotides
yhgO and glgB are separated by 157 nucleotides
glgB and glgX overlap by 4 nucleotides
NOLOHH_08660: yhgN - NAAT family transporter YhgN, at 1,674,229 to 1,674,822
yhgN
NOLOHH_08665: asd - aspartate-semialdehyde dehydrogenase, at 1,675,015 to 1,676,118
asd
NOLOHH_08670: yhgO - Protein YhgO, at 1,676,192 to 1,676,233
yhgO
NOLOHH_08675: glgB - 1,4-alpha-glucan branching enzyme, at 1,676,391 to 1,678,577
glgB
NOLOHH_08680: glgX - glycogen debranching protein GlgX, at 1,678,574 to 1,680,547
glgX
Group
Condition
NOLOHH
_08660
NOLOHH
_08665
NOLOHH
_08670
NOLOHH
_08675
NOLOHH
_08680
yhgN
asd
yhgO
glgB
glgX
phage
TP7
+0.0
N.D.
-0.9
+0.1
+0.1
carbon source
Casamino-acids
+0.1
N.D.
-0.7
+0.0
-0.1
phage
Bas69
-0.3
N.D.
-0.4
+0.1
+0.0
phage
RB49
-0.0
N.D.
-0.6
+0.1
+0.0
no phage control
Control_ECOR27
+0.1
N.D.
-0.7
+0.0
+0.2
phage
TP12
-0.4
N.D.
-0.1
+0.1
+0.0
phage
Bas09
-0.0
N.D.
-0.4
+0.1
+0.0
phage
K5
-0.0
N.D.
-0.4
+0.0
+0.1
phage
TP2
+0.2
N.D.
-0.4
-0.0
-0.0
phage
TP12
-0.1
N.D.
-0.1
+0.0
+0.0
carbon source
D-Glucose
-0.2
N.D.
+0.2
-0.1
+0.0
phage
Bas67
-0.1
N.D.
-0.1
+0.1
-0.0
phage
K5
+0.1
N.D.
-0.3
+0.1
+0.0
phage
Bas67
+0.0
N.D.
-0.2
+0.1
+0.1
carbon source
D-Glucose
+0.2
N.D.
+0.0
-0.1
+0.0
carbon source
L-Arabinose
+0.0
N.D.
+0.0
+0.1
-0.1
carbon source
Sodium-DL-Lactate
+0.0
N.D.
-0.1
+0.2
-0.0
carbon source
L-Arabinose
-0.3
N.D.
+0.5
-0.0
+0.0
carbon source
Casamino-acids
+0.1
N.D.
+0.1
-0.0
-0.0
carbon source
L-Rhamnose
+0.1
N.D.
-0.0
+0.1
+0.1
carbon source
L-Rhamnose
-0.3
N.D.
+0.2
+0.2
+0.2
carbon source
Sodium-DL-Lactate
+0.0
N.D.
+0.5
+0.2
+0.0
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