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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
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Top 22 experiments (either direction), sorted by average fitness
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500 nt
hicB and nikE are separated by 119 nucleotides
nikE and nikE are separated by 5 nucleotides
nikE and nikD overlap by 4 nucleotides
nikD and nikC overlap by 1 nucleotides
NOLOHH_08415: hicB - toxin-antitoxin system HicB family antitoxin, at 1,627,768 to 1,628,127
hicB
NOLOHH_08420: nikE - nickel import ATP-binding protein NikE, at 1,628,247 to 1,628,648
nikE
NOLOHH_08425: nikE - nickel import ATP-binding protein NikE, at 1,628,654 to 1,629,460
nikE
NOLOHH_08430: nikD - nickel import ATP-binding protein NikD, at 1,629,457 to 1,630,221
nikD
NOLOHH_08435: nikC - nickel ABC transporter permease subunit NikC, at 1,630,221 to 1,631,054
nikC
Group
Condition
NOLOHH
_08415
NOLOHH
_08420
NOLOHH
_08425
NOLOHH
_08430
NOLOHH
_08435
hicB
nikE
nikE
nikD
nikC
phage
Bas69
-0.3
-0.2
-0.2
-0.1
-0.2
carbon source
Casamino-acids
-0.2
-0.2
-0.0
-0.4
+0.1
carbon source
L-Rhamnose
-0.1
+0.1
-0.1
-0.2
-0.3
phage
K5
-0.1
-0.1
-0.0
-0.1
+0.0
carbon source
D-Glucose
+0.0
-0.1
-0.1
+0.1
-0.2
phage
TP12
+0.1
-0.1
-0.1
-0.0
-0.0
phage
Bas09
+0.1
-0.2
-0.2
-0.0
+0.1
carbon source
Casamino-acids
-0.1
+0.0
-0.2
+0.1
-0.1
phage
RB49
-0.0
-0.2
-0.2
+0.3
+0.0
no phage control
Control_ECOR27
-0.1
-0.1
+0.1
-0.1
+0.0
carbon source
L-Arabinose
+0.0
-0.4
+0.2
-0.0
+0.1
phage
Bas67
-0.1
+0.0
-0.1
+0.1
+0.1
carbon source
Sodium-DL-Lactate
-0.1
-0.0
-0.1
+0.3
-0.1
phage
TP7
-0.2
-0.1
+0.2
+0.1
+0.1
carbon source
L-Rhamnose
+0.1
-0.4
+0.2
+0.3
-0.0
carbon source
L-Arabinose
+0.3
+0.1
-0.2
-0.2
+0.1
phage
Bas67
+0.0
+0.0
+0.0
+0.0
+0.1
phage
TP12
+0.0
+0.1
-0.1
+0.2
+0.1
phage
TP2
+0.1
-0.1
+0.1
+0.3
-0.0
phage
K5
+0.1
+0.0
-0.1
+0.2
+0.1
carbon source
Sodium-DL-Lactate
+0.2
+0.2
-0.1
+0.1
+0.1
carbon source
D-Glucose
+0.1
+0.2
+0.0
+0.3
+0.1
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