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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
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500 nt
rsmJ and dtpB are separated by 48 nucleotides
dtpB and uspA are separated by 316 nucleotides
uspA and uspB are separated by 390 nucleotides
uspB and pitA are separated by 70 nucleotides
NOLOHH_08355: rsmJ - 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ, at 1,610,173 to 1,610,925
rsmJ
NOLOHH_08360: dtpB - dipeptide/tripeptide permease DtpB, at 1,610,974 to 1,612,443
dtpB
NOLOHH_08365: uspA - universal stress protein UspA, at 1,612,760 to 1,613,194
uspA
NOLOHH_08370: uspB - universal stress protein UspB, at 1,613,585 to 1,613,920
uspB
NOLOHH_08375: pitA - inorganic phosphate transporter PitA, at 1,613,991 to 1,615,490
pitA
Group
Condition
NOLOHH
_08355
NOLOHH
_08360
NOLOHH
_08365
NOLOHH
_08370
NOLOHH
_08375
rsmJ
dtpB
uspA
uspB
pitA
phage
TP2
-0.5
-0.4
-0.5
-0.2
-0.6
phage
TP12
-0.7
-0.1
+0.1
-0.2
-1.0
phage
RB49
-0.3
-0.0
+0.1
-0.1
-1.4
no phage control
Control_ECOR27
+0.3
-0.1
-0.3
-0.2
-1.5
phage
Bas09
-0.2
-0.2
-0.2
-0.1
-0.8
phage
Bas67
-0.4
+0.0
-0.1
-0.0
-0.8
carbon source
Casamino-acids
-0.8
-0.1
+0.1
+0.0
-0.4
phage
TP12
-0.5
-0.1
+0.1
-0.1
-0.6
phage
K5
-0.4
+0.0
-0.2
-0.1
-0.5
phage
Bas67
+0.3
-0.0
-0.2
-0.1
-0.8
phage
K5
+0.3
-0.1
-0.2
-0.1
-0.4
carbon source
Casamino-acids
-0.7
-0.2
+0.2
+0.1
+0.0
carbon source
L-Arabinose
-0.0
+0.1
+0.2
+0.2
-1.0
phage
TP7
-0.4
-0.1
-0.1
-0.1
+0.2
carbon source
D-Glucose
-0.3
+0.1
+0.4
-0.0
-0.6
carbon source
L-Arabinose
-0.4
+0.2
+0.1
+0.3
-0.4
carbon source
D-Glucose
+0.1
+0.0
+0.3
-0.1
-0.4
carbon source
L-Rhamnose
-0.7
+0.1
+0.2
+0.2
+0.3
phage
Bas69
+0.1
-0.3
+0.1
-0.2
+0.5
carbon source
Sodium-DL-Lactate
-0.3
-0.1
+0.1
-0.1
+0.6
carbon source
Sodium-DL-Lactate
-0.4
-0.1
+0.1
-0.0
+1.0
carbon source
L-Rhamnose
+0.3
+0.1
+0.5
+0.0
+0.5
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