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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
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Top 22 experiments (either direction), sorted by average fitness
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500 nt
NOLOHH_07760 and yiaW are separated by 113 nucleotides
yiaW and yiaV are separated by 5 nucleotides
yiaV and yiaU overlap by 4 nucleotides
yiaU and yiaT are separated by 123 nucleotides
NOLOHH_07760: NOLOHH_07760 - hypothetical protein, at 1,488,797 to 1,489,009
_07760
NOLOHH_07765: yiaW - Inner membrane protein YiaW, at 1,489,123 to 1,489,446
yiaW
NOLOHH_07770: yiaV - Inner membrane protein YiaV, at 1,489,452 to 1,490,588
yiaV
NOLOHH_07775: yiaU - Uncharacterized HTH-type transcriptional regulator YiaU, at 1,490,585 to 1,491,559
yiaU
NOLOHH_07780: yiaT - Putative outer membrane protein YiaT, at 1,491,683 to 1,492,423
yiaT
Group
Condition
NOLOHH
_07760
NOLOHH
_07765
NOLOHH
_07770
NOLOHH
_07775
NOLOHH
_07780
yiaW
yiaV
yiaU
yiaT
phage
RB49
-0.4
-1.1
+0.0
-0.2
-0.1
phage
Bas67
-0.7
-0.8
+0.0
-0.0
-0.0
phage
K5
-0.4
-1.1
-0.0
-0.0
+0.1
phage
TP2
-0.8
-0.4
+0.0
+0.1
+0.1
phage
Bas69
+0.4
-1.3
-0.3
-0.1
+0.3
carbon source
Casamino-acids
-1.0
+0.2
-0.0
-0.2
+0.1
carbon source
L-Arabinose
-0.5
-0.6
+0.0
-0.0
+0.2
phage
TP7
-0.3
-0.4
-0.0
-0.3
+0.2
phage
K5
-0.1
-0.9
+0.1
-0.1
+0.2
carbon source
Sodium-DL-Lactate
-0.4
-0.3
+0.0
+0.2
-0.0
carbon source
Sodium-DL-Lactate
-0.1
-0.6
+0.1
+0.1
-0.1
carbon source
L-Rhamnose
-0.1
-0.1
-0.3
+0.1
-0.1
phage
Bas67
-0.1
-0.2
-0.0
-0.1
+0.0
carbon source
L-Arabinose
-0.4
-0.3
+0.0
-0.1
+0.3
phage
TP12
-0.5
+0.1
+0.1
-0.1
+0.1
phage
TP12
-0.1
+0.0
-0.0
+0.1
-0.2
carbon source
D-Glucose
+0.4
-0.3
-0.1
-0.2
-0.0
no phage control
Control_ECOR27
+0.3
-0.4
-0.1
+0.1
+0.0
phage
Bas09
+0.4
-0.1
+0.1
-0.1
-0.1
carbon source
D-Glucose
+0.6
-0.3
+0.0
+0.1
-0.1
carbon source
Casamino-acids
+0.4
-0.2
-0.0
+0.4
+0.1
carbon source
L-Rhamnose
+0.5
+0.4
+0.2
+0.0
-0.1
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