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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
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500 nt
rfaJ and rfaB are separated by 8 nucleotides
rfaB and rfaL are separated by 35 nucleotides
rfaL and rfaC overlap by 4 nucleotides
rfaC and rfaF are separated by 3 nucleotides
NOLOHH_07555: rfaJ - glucosyltransferase, at 1,436,528 to 1,437,541
rfaJ
NOLOHH_07560: rfaB - UDP-glucose--(glucosyl)LPS alpha-1,2-glucosyltransferase, at 1,437,550 to 1,438,692
rfaB
NOLOHH_07565: rfaL - O-antigen ligase RfaL, at 1,438,728 to 1,439,936
rfaL
NOLOHH_07570: rfaC - lipopolysaccharide heptosyltransferase RfaC, at 1,439,933 to 1,440,925
rfaC
NOLOHH_07575: rfaF - ADP-heptose--LPS heptosyltransferase RfaF, at 1,440,929 to 1,441,975
rfaF
Group
Condition
NOLOHH
_07555
NOLOHH
_07560
NOLOHH
_07565
NOLOHH
_07570
NOLOHH
_07575
rfaJ
rfaB
rfaL
rfaC
rfaF
phage
K5
-4.4
-4.3
-4.6
N.D.
-1.9
phage
Bas67
-4.2
-4.2
-4.5
N.D.
-1.8
phage
K5
-4.3
-4.0
-4.5
N.D.
-1.8
phage
Bas67
-4.2
-4.1
-4.4
N.D.
-1.7
phage
Bas09
-4.2
-3.8
-4.4
N.D.
-1.7
phage
TP2
-3.6
-3.5
-3.8
N.D.
-1.1
phage
TP12
-3.2
-3.4
-3.9
N.D.
-1.1
phage
Bas69
-2.9
-3.3
-3.6
N.D.
-0.9
phage
TP12
-2.6
-3.1
-3.3
N.D.
-1.2
phage
RB49
-3.0
-3.1
-3.3
N.D.
-0.5
phage
TP7
-3.2
-3.5
-4.0
N.D.
+2.1
carbon source
Casamino-acids
-0.5
-0.6
-0.8
N.D.
-1.8
carbon source
L-Arabinose
-1.2
+1.0
+0.1
N.D.
-3.3
carbon source
Casamino-acids
-0.7
-1.1
-0.5
N.D.
-1.0
carbon source
D-Glucose
+0.0
+0.3
-0.1
N.D.
-2.1
no phage control
Control_ECOR27
+0.4
+0.0
-0.0
N.D.
-1.5
carbon source
D-Glucose
-0.3
-0.1
+0.4
N.D.
-0.8
carbon source
Sodium-DL-Lactate
+0.5
+0.7
+0.3
N.D.
-1.7
carbon source
L-Rhamnose
-1.4
-0.3
-0.3
N.D.
+2.0
carbon source
L-Arabinose
+1.0
-0.5
-0.2
N.D.
-0.1
carbon source
L-Rhamnose
+0.4
-0.6
-0.3
N.D.
+1.1
carbon source
Sodium-DL-Lactate
+0.9
+0.5
+0.7
N.D.
+1.4
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