Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 22 experiments (either direction), sorted by average fitness
Or view
all 22 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
tnaA and tnaC are separated by 220 nucleotides
tnaC and NOLOHH_07125 are separated by 242 nucleotides
NOLOHH_07125 and yidC are separated by 105 nucleotides
yidC and rnpA are separated by 223 nucleotides
NOLOHH_07115: tnaA - tryptophanase, at 1,349,608 to 1,351,023
tnaA
NOLOHH_07120: tnaC - tryptophanase leader peptide, at 1,351,244 to 1,351,318
tnaC
NOLOHH_07125: NOLOHH_07125 - tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE, at 1,351,561 to 1,352,925
_07125
NOLOHH_07130: yidC - membrane protein insertase YidC, at 1,353,031 to 1,354,677
yidC
NOLOHH_07135: rnpA - ribonuclease P protein component, at 1,354,901 to 1,355,227
rnpA
Group
Condition
NOLOHH
_07115
NOLOHH
_07120
NOLOHH
_07125
NOLOHH
_07130
NOLOHH
_07135
tnaA
tnaC
yidC
rnpA
carbon source
D-Glucose
-0.0
+0.0
-4.6
N.D.
N.D.
carbon source
L-Arabinose
-0.2
-0.2
-4.1
N.D.
N.D.
carbon source
Sodium-DL-Lactate
+0.0
+0.2
-3.3
N.D.
N.D.
carbon source
Sodium-DL-Lactate
+0.1
-0.1
-2.6
N.D.
N.D.
phage
K5
+0.2
-0.2
-1.7
N.D.
N.D.
phage
Bas09
+0.0
+0.1
-1.7
N.D.
N.D.
carbon source
L-Rhamnose
+0.2
+0.2
-2.0
N.D.
N.D.
phage
K5
+0.1
+0.0
-1.6
N.D.
N.D.
phage
TP12
+0.1
-0.1
-1.5
N.D.
N.D.
carbon source
D-Glucose
+0.1
+0.1
-1.5
N.D.
N.D.
carbon source
L-Rhamnose
-0.0
+0.1
-1.4
N.D.
N.D.
phage
Bas67
+0.1
+0.3
-1.6
N.D.
N.D.
phage
RB49
+0.1
+0.1
-1.3
N.D.
N.D.
phage
TP12
+0.2
+0.2
-1.2
N.D.
N.D.
carbon source
Casamino-acids
+0.2
+0.0
-1.0
N.D.
N.D.
phage
Bas67
+0.1
+0.1
-0.9
N.D.
N.D.
phage
TP7
+0.1
-0.0
-0.7
N.D.
N.D.
carbon source
L-Arabinose
-0.1
+0.0
-0.4
N.D.
N.D.
no phage control
Control_ECOR27
-0.1
+0.1
-0.4
N.D.
N.D.
carbon source
Casamino-acids
+0.0
+0.1
-0.5
N.D.
N.D.
phage
TP2
+0.2
+0.5
-0.4
N.D.
N.D.
phage
Bas69
+0.3
+0.4
+0.1
N.D.
N.D.
remove
NOLOHH_07115
plot
remove
NOLOHH_07120
plot
remove
NOLOHH_07125
remove
NOLOHH_07130
plot
remove
NOLOHH_07135
plot