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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
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500 nt
yihF and dsbA are separated by 154 nucleotides
dsbA and srkA are separated by 16 nucleotides
srkA and yihD are separated by 76 nucleotides
yihD and mobA are separated by 69 nucleotides
NOLOHH_06295: yihF - Uncharacterized protein YihF, at 1,185,560 to 1,186,990
yihF
NOLOHH_06300: dsbA - thiol:disulfide interchange protein DsbA, at 1,187,145 to 1,187,771
dsbA
NOLOHH_06305: srkA - stress response kinase SrkA, at 1,187,788 to 1,188,774
srkA
NOLOHH_06310: yihD - Protein YihD, at 1,188,851 to 1,189,120
yihD
NOLOHH_06315: mobA - molybdenum cofactor guanylyltransferase MobA, at 1,189,190 to 1,189,774
mobA
Group
Condition
NOLOHH
_06295
NOLOHH
_06300
NOLOHH
_06305
NOLOHH
_06310
NOLOHH
_06315
yihF
dsbA
srkA
yihD
mobA
phage
Bas69
+0.0
-0.7
-0.2
-1.6
-0.0
phage
K5
-0.0
-1.5
-0.2
-0.6
-0.1
phage
TP12
+0.1
-1.1
+0.1
-1.4
-0.1
phage
K5
-0.1
-1.4
-0.4
+0.1
+0.0
phage
TP2
-0.0
-1.6
+0.2
-0.2
-0.1
phage
TP7
+0.1
-1.0
-0.3
-0.2
-0.2
phage
TP12
+0.3
-1.0
+0.2
-0.7
+0.1
carbon source
L-Arabinose
-0.2
-1.5
-0.2
+0.8
+0.0
phage
Bas67
-0.0
-0.6
+0.0
-0.2
-0.1
phage
Bas09
-0.1
-0.6
-0.0
-0.0
-0.2
phage
RB49
+0.4
-0.9
-0.1
-0.1
+0.1
no phage control
Control_ECOR27
-0.2
-0.2
+0.3
-0.2
-0.3
carbon source
Casamino-acids
-0.1
-0.7
+0.3
+0.1
-0.1
carbon source
L-Arabinose
-0.0
-0.2
-0.0
+0.3
-0.2
carbon source
Casamino-acids
+0.0
-0.3
+0.2
-0.1
+0.3
carbon source
Sodium-DL-Lactate
+0.1
+0.6
-0.0
-0.4
-0.2
phage
Bas67
-0.0
-0.1
+0.3
-0.1
+0.1
carbon source
Sodium-DL-Lactate
+0.0
+0.5
+0.0
-0.1
-0.1
carbon source
D-Glucose
-0.0
+0.4
+0.1
+0.0
-0.0
carbon source
D-Glucose
-0.0
-0.0
-0.1
+0.5
+0.1
carbon source
L-Rhamnose
+0.3
+1.8
+0.1
-0.1
-0.7
carbon source
L-Rhamnose
+0.3
+2.1
-0.2
+0.1
-0.3
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