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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
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Top 22 experiments (either direction), sorted by average fitness
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500 nt
alsE and alsK overlap by 17 nucleotides
alsK and yjcS are separated by 272 nucleotides
yjcS and ytcA are separated by 208 nucleotides
ytcA and mdtN are separated by 18 nucleotides
NOLOHH_04990: alsE - D-allulose-6-phosphate 3-epimerase, at 910,641 to 911,336
alsE
NOLOHH_04995: alsK - allose kinase, at 911,320 to 912,249
alsK
NOLOHH_05000: yjcS - alkyl sulfatase YjcS, at 912,522 to 914,507
yjcS
NOLOHH_05005: ytcA - Uncharacterized protein YtcA, at 914,716 to 914,991
ytcA
NOLOHH_05010: mdtN - multidrug efflux transporter periplasmic adaptor subunit MdtN, at 915,010 to 916,041
mdtN
Group
Condition
NOLOHH
_04990
NOLOHH
_04995
NOLOHH
_05000
NOLOHH
_05005
NOLOHH
_05010
alsE
alsK
yjcS
ytcA
mdtN
carbon source
L-Arabinose
+0.2
-0.7
-0.0
-0.2
-0.3
carbon source
D-Glucose
+0.0
+0.2
+0.1
-0.6
-0.0
phage
TP12
+0.1
-0.1
-0.2
+0.1
-0.1
carbon source
Sodium-DL-Lactate
-0.0
+0.0
+0.1
-0.1
-0.0
carbon source
Casamino-acids
-0.1
+0.2
+0.0
-0.3
+0.1
carbon source
L-Rhamnose
-0.1
-0.0
-0.0
+0.2
-0.1
carbon source
L-Arabinose
-0.2
-0.2
+0.1
+0.5
+0.1
carbon source
L-Rhamnose
-0.2
-0.0
+0.0
+0.5
-0.2
phage
TP12
-0.2
+0.0
-0.0
+0.3
+0.1
phage
TP2
-0.1
-0.0
-0.2
+0.5
+0.0
phage
K5
-0.0
-0.1
+0.0
+0.3
+0.2
phage
RB49
+0.0
-0.2
+0.1
+0.4
+0.1
no phage control
Control_ECOR27
-0.1
+0.1
+0.1
+0.2
+0.2
carbon source
Sodium-DL-Lactate
-0.0
+0.1
-0.0
+0.3
+0.1
carbon source
D-Glucose
-0.2
-0.1
+0.0
+0.8
-0.0
phage
TP7
-0.1
-0.2
+0.0
+0.6
+0.2
phage
K5
-0.1
-0.2
-0.0
+0.8
+0.1
phage
Bas67
+0.0
-0.2
-0.1
+0.6
+0.3
phage
Bas67
-0.1
-0.1
-0.1
+0.9
+0.2
carbon source
Casamino-acids
+0.2
+0.2
+0.1
+0.5
-0.1
phage
Bas69
-0.3
+0.3
-0.1
+0.9
+0.2
phage
Bas09
+0.0
-0.1
+0.1
+1.4
+0.1
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