Fitness for 5 genes in Escherichia coli ECOR27

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500 ntcadC and cadB are separated by 365 nucleotidescadB and cadA are separated by 79 nucleotidescadA and dtpC are separated by 58 nucleotidesdtpC and lysS are separated by 236 nucleotides NOLOHH_04730: cadC - lysine decarboxylation/transport transcriptional activator CadC, at 857,687 to 859,225 cadC NOLOHH_04735: cadB - cadaverine/lysine antiporter, at 859,591 to 860,925 cadB NOLOHH_04740: cadA - lysine decarboxylase CadA, at 861,005 to 863,152 cadA NOLOHH_04745: dtpC - dipeptide/tripeptide permease DtpC, at 863,211 to 864,668 dtpC NOLOHH_04750: lysS - lysine--tRNA ligase, at 864,905 to 866,422 lysS
Group Condition NOLOHH_04730 NOLOHH_04735 NOLOHH_04740 NOLOHH_04745 NOLOHH_04750
cadC cadB cadA dtpC lysS
carbon source L-Arabinose -0.3 -0.2 -0.1 -0.1 -0.1
phage TP7 -0.1 -0.2 +0.0 -0.0 -0.1
phage TP12 -0.0 -0.3 -0.0 -0.1 -0.1
phage K5 -0.1 -0.2 -0.1 -0.1 +0.1
phage Bas69 -0.1 -0.0 -0.1 -0.1 -0.0
phage TP12 -0.0 -0.1 -0.2 -0.1 +0.1
carbon source L-Arabinose -0.1 -0.3 -0.0 +0.1 -0.0
carbon source L-Rhamnose +0.0 +0.0 +0.0 +0.0 -0.3
phage K5 -0.1 +0.0 -0.0 -0.1 -0.0
carbon source L-Rhamnose +0.0 -0.1 -0.0 -0.0 -0.1
phage Bas67 -0.1 +0.0 -0.1 +0.0 +0.0
carbon source Casamino-acids -0.0 -0.0 -0.1 +0.1 -0.1
phage Bas67 +0.0 -0.0 -0.0 -0.0 -0.1
carbon source Sodium-DL-Lactate +0.0 +0.0 -0.0 -0.0 -0.0
carbon source D-Glucose -0.1 -0.0 +0.1 -0.0 +0.1
carbon source D-Glucose +0.0 -0.0 -0.0 -0.0 +0.0
phage TP2 -0.2 +0.0 +0.0 -0.0 +0.1
phage RB49 +0.1 -0.1 -0.0 +0.1 +0.0
carbon source Casamino-acids -0.1 +0.1 -0.0 +0.1 -0.1
no phage control Control_ECOR27 -0.0 -0.1 +0.0 -0.1 +0.1
carbon source Sodium-DL-Lactate -0.0 +0.1 -0.0 +0.1 +0.0
phage Bas09 +0.1 +0.0 -0.1 +0.1 +0.0
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