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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
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500 nt
priB and rpsF are separated by 6 nucleotides
rpsF and yjfY are separated by 326 nucleotides
yjfY and ulaF are separated by 128 nucleotides
ulaF and ulaE overlap by 1 nucleotides
NOLOHH_04370: priB - primosomal replication protein N, at 793,063 to 793,377
priB
NOLOHH_04375: rpsF - 30S ribosomal protein S6, at 793,384 to 793,779
rpsF
NOLOHH_04380: yjfY - Uncharacterized protein YjfY, at 794,106 to 794,381
yjfY
NOLOHH_04385: ulaF - L-ribulose-5-phosphate 4-epimerase UlaF, at 794,510 to 795,196
ulaF
NOLOHH_04390: ulaE - L-ribulose-5-phosphate 3-epimerase UlaE, at 795,196 to 796,050
ulaE
Group
Condition
NOLOHH
_04370
NOLOHH
_04375
NOLOHH
_04380
NOLOHH
_04385
NOLOHH
_04390
priB
rpsF
yjfY
ulaF
ulaE
phage
Bas69
N.D.
N.D.
-0.4
-0.6
-0.3
carbon source
D-Glucose
N.D.
N.D.
-0.5
-0.0
-0.1
carbon source
L-Arabinose
N.D.
N.D.
-0.3
+0.1
-0.4
carbon source
L-Rhamnose
N.D.
N.D.
-0.0
-0.4
-0.1
phage
Bas67
N.D.
N.D.
+0.0
-0.7
+0.2
carbon source
Casamino-acids
N.D.
N.D.
-0.3
+0.1
-0.1
phage
Bas09
N.D.
N.D.
+0.0
-0.3
-0.0
phage
TP7
N.D.
N.D.
-0.1
-0.2
+0.1
phage
TP12
N.D.
N.D.
-0.1
+0.1
-0.2
phage
K5
N.D.
N.D.
+0.1
-0.4
+0.2
carbon source
Sodium-DL-Lactate
N.D.
N.D.
+0.1
-0.2
+0.1
no phage control
Control_ECOR27
N.D.
N.D.
+0.0
-0.1
+0.0
phage
K5
N.D.
N.D.
-0.1
-0.1
+0.1
carbon source
L-Rhamnose
N.D.
N.D.
+0.2
-0.2
-0.0
carbon source
D-Glucose
N.D.
N.D.
-0.1
+0.1
+0.1
phage
TP2
N.D.
N.D.
+0.2
-0.3
+0.2
phage
RB49
N.D.
N.D.
+0.0
-0.1
+0.2
phage
Bas67
N.D.
N.D.
-0.2
+0.2
+0.1
carbon source
L-Arabinose
N.D.
N.D.
-0.0
+0.4
-0.2
phage
TP12
N.D.
N.D.
-0.0
+0.0
+0.2
carbon source
Sodium-DL-Lactate
N.D.
N.D.
+0.0
+0.2
+0.0
carbon source
Casamino-acids
N.D.
N.D.
+0.0
+0.3
-0.1
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