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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
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Top 22 experiments (either direction), sorted by average fitness
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500 nt
NOLOHH_03965 and NOLOHH_03975 are separated by 744 nucleotides
NOLOHH_03975 and NOLOHH_03980 are separated by 236 nucleotides
NOLOHH_03980 and NOLOHH_03985 are separated by 185 nucleotides
NOLOHH_03985 and NOLOHH_03990 are separated by 259 nucleotides
NOLOHH_03965: NOLOHH_03965 - Integrase catalytic domain-containing protein, at 713,659 to 713,979
_03965
NOLOHH_03975: NOLOHH_03975 - Transposase, at 714,724 to 715,011
_03975
NOLOHH_03980: NOLOHH_03980 - IS110 family transposase, at 715,248 to 715,745
_03980
NOLOHH_03985: NOLOHH_03985 - Transposase, at 715,931 to 716,080
_03985
NOLOHH_03990: NOLOHH_03990 - restriction endonuclease, at 716,340 to 717,521
_03990
Group
Condition
NOLOHH
_03965
NOLOHH
_03975
NOLOHH
_03980
NOLOHH
_03985
NOLOHH
_03990
phage
K5
-0.9
+0.1
-0.0
-0.0
-0.3
phage
TP12
-0.4
+0.0
+0.5
-0.1
-0.9
carbon source
D-Glucose
-1.1
+0.4
+0.0
+0.0
-0.1
phage
TP7
-0.4
+0.1
+0.1
-0.1
-0.3
carbon source
L-Arabinose
-0.3
+0.1
-0.5
+0.0
+0.1
phage
Bas67
-0.7
+0.2
+0.4
-0.2
+0.1
phage
K5
-0.2
-0.1
+0.3
-0.2
-0.1
phage
Bas69
-0.3
-0.1
+0.2
-0.1
-0.0
carbon source
L-Rhamnose
-0.5
+0.0
+0.4
+0.0
-0.2
carbon source
L-Arabinose
-0.7
-0.2
+0.6
+0.1
+0.1
phage
TP12
+0.3
+0.0
+0.2
+0.3
-0.8
phage
RB49
+0.0
+0.2
+0.5
-0.2
-0.4
no phage control
Control_ECOR27
+0.1
+0.1
+0.3
-0.1
-0.2
carbon source
Casamino-acids
+0.7
-0.3
-0.1
-0.0
-0.2
carbon source
Sodium-DL-Lactate
+0.1
+0.1
+0.0
+0.0
-0.2
carbon source
D-Glucose
+0.5
+0.1
+0.0
-0.2
-0.1
phage
Bas09
+0.3
+0.2
+0.2
+0.2
-0.3
carbon source
Sodium-DL-Lactate
+0.6
+0.1
-0.1
+0.1
-0.0
phage
TP2
-0.2
+0.3
+0.3
+0.0
+0.3
phage
Bas67
+0.0
+0.2
+0.6
+0.0
-0.0
carbon source
Casamino-acids
+0.5
+0.1
+0.1
+0.2
+0.0
carbon source
L-Rhamnose
+0.7
-0.1
+0.3
+0.6
-0.2
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