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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
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500 nt
fimC and fimI are separated by 36 nucleotides
fimI and fimA are separated by 106 nucleotides
fimA and fimE are separated by 486 nucleotides
fimE and fimB are separated by 477 nucleotides
NOLOHH_03920: fimC - type 1 fimbria chaperone FimC, at 704,415 to 705,140
fimC
NOLOHH_03925: fimI - Fimbrin-like protein fimI precursor, at 705,177 to 705,674
fimI
NOLOHH_03930: fimA - Type-1 fimbrial protein, A chain precursor, at 705,781 to 706,329
fimA
NOLOHH_03935: fimE - type 1 fimbria switch DNA invertase FimE, at 706,816 to 707,412
fimE
NOLOHH_03940: fimB - type 1 fimbria switch DNA invertase FimB, at 707,890 to 708,492
fimB
Group
Condition
NOLOHH
_03920
NOLOHH
_03925
NOLOHH
_03930
NOLOHH
_03935
NOLOHH
_03940
fimC
fimI
fimA
fimE
fimB
phage
Bas69
-0.0
-0.2
-0.1
-0.2
-0.1
phage
TP12
+0.0
-0.3
-0.4
+0.4
-0.1
phage
TP7
+0.1
-0.4
+0.0
+0.0
-0.2
phage
TP2
-0.1
+0.0
-0.2
+0.2
-0.3
phage
Bas67
-0.7
-0.5
-0.2
+1.3
-0.0
phage
RB49
-0.0
+0.1
+0.2
-0.3
+0.1
carbon source
L-Rhamnose
+0.1
+0.3
+0.3
-0.6
+0.1
carbon source
L-Arabinose
+0.0
+0.5
+0.6
-1.7
+0.8
phage
K5
-0.1
-0.2
-0.2
+1.0
-0.2
carbon source
L-Arabinose
+0.1
+0.2
+0.5
-1.1
+0.5
phage
Bas09
-0.2
-0.7
-0.3
+1.8
-0.3
phage
Bas67
-0.2
-0.5
-0.3
+1.8
-0.2
no phage control
Control_ECOR27
-0.5
-0.5
-0.4
+2.6
-0.4
phage
TP12
+0.2
-0.0
+0.1
+0.7
+0.1
carbon source
Sodium-DL-Lactate
+0.4
+0.4
+0.4
-0.8
+0.7
carbon source
L-Rhamnose
-0.0
+0.3
+0.2
+0.1
+0.6
phage
K5
+0.2
+0.1
-0.6
+1.6
-0.2
carbon source
Casamino-acids
+0.5
+0.4
+0.5
-0.6
+0.5
carbon source
Sodium-DL-Lactate
+0.3
+0.7
+0.5
-0.6
+0.5
carbon source
D-Glucose
+0.6
+0.6
+0.6
-0.7
+0.9
carbon source
Casamino-acids
+0.8
+0.7
+0.9
-1.2
+0.9
carbon source
D-Glucose
+0.8
+0.5
+0.7
-0.8
+1.0
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