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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
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Top 22 experiments (either direction), sorted by average fitness
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500 nt
deoC and yjjI are separated by 257 nucleotides
yjjI and yjjW overlap by 29 nucleotides
yjjW and yjjV are separated by 112 nucleotides
yjjV and yjjU overlap by 4 nucleotides
NOLOHH_03565: deoC - deoxyribose-phosphate aldolase, at 633,338 to 634,117
deoC
NOLOHH_03570: yjjI - Uncharacterized protein YjjI, at 634,375 to 635,925
yjjI
NOLOHH_03575: yjjW - Putative glycyl-radical enzyme activating enzyme YjjW, at 635,897 to 636,760
yjjW
NOLOHH_03580: yjjV - metal-dependent hydrolase, at 636,873 to 637,655
yjjV
NOLOHH_03585: yjjU - Uncharacterized protein YjjU, at 637,652 to 638,725
yjjU
Group
Condition
NOLOHH
_03565
NOLOHH
_03570
NOLOHH
_03575
NOLOHH
_03580
NOLOHH
_03585
deoC
yjjI
yjjW
yjjV
yjjU
phage
Bas69
-0.2
-0.2
-0.6
-0.2
-0.0
carbon source
L-Rhamnose
-0.3
+0.1
-0.2
-0.2
+0.1
phage
TP2
-0.3
-0.1
-0.2
+0.3
-0.2
phage
TP12
-0.7
+0.1
+0.1
+0.4
-0.2
carbon source
D-Glucose
+0.1
-0.1
-0.2
-0.2
+0.0
phage
RB49
+0.2
+0.1
-0.3
+0.0
-0.2
carbon source
Sodium-DL-Lactate
-0.1
+0.1
-0.1
-0.0
+0.1
phage
TP12
+0.4
-0.1
-0.3
-0.1
-0.0
carbon source
Sodium-DL-Lactate
-0.4
+0.2
+0.2
-0.0
+0.1
phage
TP7
+0.0
+0.1
-0.1
+0.2
-0.0
carbon source
L-Arabinose
-0.4
+0.1
+0.2
+0.0
+0.2
phage
Bas67
+0.1
+0.1
+0.1
+0.0
-0.0
carbon source
L-Arabinose
+0.1
-0.1
+0.1
+0.1
-0.1
phage
Bas09
-0.0
+0.1
-0.0
+0.2
-0.0
phage
Bas67
+0.4
+0.1
-0.2
-0.1
+0.0
phage
K5
+0.1
+0.1
+0.1
+0.1
-0.1
no phage control
Control_ECOR27
+0.2
+0.1
-0.2
+0.2
+0.0
phage
K5
+0.4
+0.1
-0.1
+0.1
-0.0
carbon source
L-Rhamnose
+0.3
+0.1
+0.2
-0.1
+0.1
carbon source
D-Glucose
+0.1
+0.3
+0.4
+0.0
+0.1
carbon source
Casamino-acids
+0.4
+0.1
+0.1
+0.2
+0.2
carbon source
Casamino-acids
+0.2
+0.2
+0.7
+0.2
+0.2
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