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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
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Top 22 experiments (either direction), sorted by average fitness
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500 nt
creB and creA are separated by 12 nucleotides
creA and robA are separated by 210 nucleotides
robA and NOLOHH_03485 overlap by 4 nucleotides
NOLOHH_03485 and yjjX are separated by 51 nucleotides
NOLOHH_03470: creB - two-component system response regulator CreB, at 614,591 to 615,280
creB
NOLOHH_03475: creA - protein CreA, at 615,293 to 615,766
creA
NOLOHH_03480: robA - MDR efflux pump AcrAB transcriptional activator RobA, at 615,977 to 616,846
robA
NOLOHH_03485: NOLOHH_03485 - putative phosphoglycerate mutase GpmB, at 616,843 to 617,490
_03485
NOLOHH_03490: yjjX - inosine/xanthosine triphosphatase, at 617,542 to 618,054
yjjX
Group
Condition
NOLOHH
_03470
NOLOHH
_03475
NOLOHH
_03480
NOLOHH
_03485
NOLOHH
_03490
creB
creA
robA
yjjX
carbon source
Sodium-DL-Lactate
+0.0
-0.2
-0.6
-0.2
-0.2
carbon source
D-Glucose
+0.2
+0.0
-0.7
-0.2
-0.3
carbon source
Sodium-DL-Lactate
+0.0
-0.2
-0.5
+0.1
-0.0
carbon source
Casamino-acids
+0.1
-0.0
-0.1
-0.1
-0.2
carbon source
D-Glucose
-0.1
+0.3
-0.1
-0.1
-0.3
carbon source
L-Rhamnose
-0.0
-0.1
-0.7
-0.3
+1.1
phage
TP12
-0.1
+0.1
+0.0
+0.3
-0.2
phage
Bas69
-0.4
+0.1
+0.3
-0.2
+0.3
carbon source
L-Rhamnose
-0.2
-0.0
+0.0
+0.1
+0.3
no phage control
Control_ECOR27
+0.1
+0.3
+0.1
-0.2
+0.2
phage
K5
-0.1
-0.2
+0.0
+0.5
+0.2
carbon source
L-Arabinose
+0.0
-0.1
-0.2
+0.2
+0.6
phage
Bas67
-0.0
+0.1
-0.1
+0.1
+0.5
phage
Bas09
-0.1
-0.1
+0.1
-0.1
+0.7
phage
K5
-0.0
-0.1
+0.2
+0.2
+0.6
phage
TP2
+0.1
+0.2
+0.3
+0.1
+0.2
phage
TP12
-0.4
+0.2
+0.2
+0.3
+0.7
carbon source
L-Arabinose
-0.0
+0.2
-0.4
+0.7
+0.6
phage
RB49
+0.1
+0.0
+0.1
+0.3
+0.4
carbon source
Casamino-acids
+0.1
+0.3
+0.0
-0.1
+0.9
phage
TP7
+0.1
-0.0
+0.3
+0.4
+0.7
phage
Bas67
+0.2
+0.1
+0.3
+0.3
+0.9
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