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Protein
Homologs
Fitness for 5 genes in
Escherichia coli ECOR27
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Top 22 experiments (either direction), sorted by average fitness
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500 nt
ileS and ribF are separated by 42 nucleotides
ribF and rpsT are separated by 328 nucleotides
rpsT and NOLOHH_03325 are separated by 482 nucleotides
NOLOHH_03325 and NOLOHH_03330 are separated by 374 nucleotides
NOLOHH_03310: ileS - isoleucine--tRNA ligase, at 582,481 to 585,297
ileS
NOLOHH_03315: ribF - bifunctional riboflavin kinase/FAD synthetase, at 585,340 to 586,281
ribF
NOLOHH_03320: rpsT - 30S ribosomal protein S20, at 586,610 to 586,873
rpsT
NOLOHH_03325: NOLOHH_03325 - hypothetical protein, at 587,356 to 587,745
_03325
NOLOHH_03330: NOLOHH_03330 - T3SS effector EspX, at 588,120 to 588,776
_03330
Group
Condition
NOLOHH
_03310
NOLOHH
_03315
NOLOHH
_03320
NOLOHH
_03325
NOLOHH
_03330
ileS
ribF
rpsT
carbon source
D-Glucose
N.D.
N.D.
N.D.
N.D.
-3.9
carbon source
L-Rhamnose
N.D.
N.D.
N.D.
N.D.
-3.9
carbon source
L-Arabinose
N.D.
N.D.
N.D.
N.D.
-3.8
carbon source
L-Arabinose
N.D.
N.D.
N.D.
N.D.
-3.2
phage
Bas67
N.D.
N.D.
N.D.
N.D.
-1.3
phage
K5
N.D.
N.D.
N.D.
N.D.
-1.3
no phage control
Control_ECOR27
N.D.
N.D.
N.D.
N.D.
-1.2
carbon source
Sodium-DL-Lactate
N.D.
N.D.
N.D.
N.D.
-0.6
carbon source
Sodium-DL-Lactate
N.D.
N.D.
N.D.
N.D.
-0.6
phage
RB49
N.D.
N.D.
N.D.
N.D.
-0.4
carbon source
L-Rhamnose
N.D.
N.D.
N.D.
N.D.
-0.3
phage
TP2
N.D.
N.D.
N.D.
N.D.
+0.2
phage
Bas69
N.D.
N.D.
N.D.
N.D.
+0.2
carbon source
D-Glucose
N.D.
N.D.
N.D.
N.D.
+0.3
carbon source
Casamino-acids
N.D.
N.D.
N.D.
N.D.
+0.3
phage
Bas67
N.D.
N.D.
N.D.
N.D.
+0.5
phage
Bas09
N.D.
N.D.
N.D.
N.D.
+0.5
phage
K5
N.D.
N.D.
N.D.
N.D.
+0.8
carbon source
Casamino-acids
N.D.
N.D.
N.D.
N.D.
+1.1
phage
TP12
N.D.
N.D.
N.D.
N.D.
+1.1
phage
TP12
N.D.
N.D.
N.D.
N.D.
+1.2
phage
TP7
N.D.
N.D.
N.D.
N.D.
+1.8
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